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Cacao

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GO:0005618cell wallPMID:15181582IDA: Inferred from Direct Assay C
This annotation made on page: STAAU:CNA
By: Rgarcia (group Team Chalupa Batman) on 2013-02-09 16:17:44 CST.




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Entry TypeChallenging User,GroupTime/DateChallenge ReasonPoints/Assessment
ChallengeBailey.dye,
Team Chloroplast
2013-04-15 12:52:56 CDT

The evidence code should be IMP since in the experiment, both an expression of the functional wild-type form and a mutated form were studied.

0
ChallengeKchiang,
Team Jukebox Heroes
2013-02-17 16:34:51 CST

Incorrect IDA notes. Figure 7 is a better representation of the article and protein. Fig. 7 shows the effect that the adhesion of collagen has on arthritis in mice through the testing of groups of mice injected with different S. aureus strains that induced higher collagen binding affinity and lower collagen binding affinity.

1
ChallengeKchiang,
Team Jukebox Heroes
2013-02-17 16:21:27 CST

The GO term: GO:0005618 (cell wall) is very broad and unspecific. A better GO term would be GO:0001952 (regulation of cell-matrix adhesion) since strains of S. aureus increase adhesion for collagen to the extra cellular walls of joint cells.

1
Private
Assessment
Bmcintosh2013-06-22 13:31:18 CDTYou need to be an instructor to view these notes.Updated by Instructor
Protein
Publication
Qualifier
Go term
Evidence
With/From
Notes
Unique/Original
Public
Assessment
JimHu2013-04-24 00:16:50 CDT

Although the localization of cna to the cell wall appears to have been previously known, experiments in this paper can be used to annotate to a more specific child of cell wall, using an IDA evidence code. Fig 1 is not an experiment.

Requires Changes
Go term
Notes
Public
Assessment
DanielRenfro2013-04-15 12:52:56 CDT

This annotation has been flagged because it has been edited since last assessment

Flagged
Private
Assessment
Bmcintosh2013-02-20 10:30:55 CSTYou need to be an instructor to view these notes.Requires Changes
Go term
Notes
Public
Assessment
DanielRenfro2013-02-17 16:34:51 CST

This annotation has been flagged because it has been edited since last assessment

Flagged
Public
Assessment
DanielRenfro2013-02-17 16:21:27 CST

This annotation has been flagged because it has been edited since last assessment

Flagged
Private
Assessment
Bmcintosh2013-02-17 14:19:19 CSTYou need to be an instructor to view these notes.Requires Changes
Protein
Publication
Qualifier
Go term
Evidence
With/From
Notes
Unique/Original