GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

Cacao

Jump to: navigation, search
GO: 0071941PMID:9022686ISA: Inferred from Sequence Alignment
This annotation made on page: PARDE:NORC
By: Wwhitm2 (group Team Step 2) on 2011-10-23 17:38:04 CDT.




You must be logged in to challenge this annotation.

Entry TypeChallenging User,GroupTime/DateChallenge ReasonPoints/Assessment
ChallengeJgorso1,
Team Step 2
2011-10-24 18:57:20 CDT

Challenger was right. Used different evidence code and different evidence from the same paper/gene.

0
ChallengeBiovzf,
Team Polymerase Chain Re-awesome
2011-10-23 21:03:02 CDT

Figure 2 is not specifically referenced anywhere in the paper. However on page 594 the authors state that the three NorB sequences showed 46% overall similarity and a BLAST demonstrated NorB had overall similarity to subunit I of cbb,-type oxidases, suggesting that NO reductase is homologous to the heme-copper oxidases.

If the sequences of the the Pa. denitrificans NorB, Ps. stutzeri NorB, Ps. aeruginosa NorB, Pa. denitrzfians, and COI sequences are not verified than the ISA evidence code cannot be used, because there is no corresponding entry for the with/from field.

2
ChallengeBiovzf,
Team Polymerase Chain Re-awesome
2011-10-23 19:04:26 CDT

Missing with/from.

GO term should be GO:0016966, nitric oxide reductase activity instead of GO:0071941, nitrogen cycle metabolic process.

2
Private
Assessment
Mkline2012-03-28 11:37:44 CDTYou need to be an instructor to view these notes.Acceptable
Private
Assessment
E-peterson2011-11-15 20:34:07 CSTYou need to be an instructor to view these notes.Requires Changes