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Cacao

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GO:0006353DNA-templated transcription, terminationPMID:7714899IDA: Inferred from Direct Assay P
This annotation made on page: BPHK0:VNUN
By: Zhm1 (group Team Red-B) on 2017-04-06 22:50:49 CDT.



TeamPoints
Team Red-B5




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Entry TypeChallenging User,GroupTime/DateChallenge ReasonPoints/Assessment
Public
Assessment
Ivanerill2017-05-24 15:08:09 CDTNo notes given.Acceptable
Protein
Publication
Qualifier
Go term
Evidence
With/From
Notes
Unique/Original
Public
Assessment
DanielRenfro2017-04-19 09:53:11 CDT

This annotation has been flagged because it has been edited since last assessment

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0006353 DNA-templated transcription, termination PMID:7714899 IDA: Inferred from Direct Assay P Figure 2 - In an in vitro system with RNA polymerase and the nun protein, increasing concentration of nun correlated with increasing amounts of relatively shorter RNA transcripts.

(Data not shown) - Adding the nun protein after completion of transcription did not shorten RNA transcripts. Thus, its unlikely nun acts by cleaving or processing RNA transcripts. Figure 3A - Without nun, RNA polymerase transcription would only pause at certain lengths of RNA, before resuming activity again. However in presence of nun, transcription would completely be completely blocked without resuming again once these similar length RNA transcripts were reached. Both with and without nun, similar length RNA transcripts would appear at similar times. Figure 3B - Next, the authors separated the the RNA transcript products onto a gel. They found that the sites that nun acted on and the sites where RNA polymerase paused were either identical or extremely close in proximity. All these results taken into consideration suggest nun arrests transcription by directly acting at RNA polymerase pause sites.||complete
CACAO 12477

on BPHK0:VNUN
Flagged
Public
Assessment
Ivanerill2017-04-15 19:12:50 CDTNo notes given.Requires Changes
Publication
Public
Assessment
Ivanerill2017-04-15 19:10:57 CDTNo notes given.Requires Changes
Publication