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Cacao

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GO:0008218bioluminescencePMID:24056099IMP: Inferred from Mutant Phenotype P
This annotation made on page: VIBF1:Q5E615
By: Heidi.Larson.1 (group Team Grapes of Staph) on 2016-04-12 05:10:27 CDT.




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Entry TypeChallenging User,GroupTime/DateChallenge ReasonPoints/Assessment
ChallengeHeidi.Larson.1,
Team Grapes of Staph
2016-04-13 10:12:11 CDT

For the With/From aspect, it appears two proteins are missing. The Vibrio harveyi was a triple mutant of LuxN, LuxQ, and cqsS. The LuxN uniprot ID was already submitted, so that leaves LuxQ and cqsS. The cqsS uniprot ID is A7N6S2, and the LuxQ uniprot ID is P54302.

7
ChallengeHeidi.Larson.1,
Team Grapes of Staph
2016-04-05 15:50:46 CDT

The with/from should be P0C5S6 (Vibrio harveyi Lux N) because the paper references the similarity between ainR of Vibrio fischeri and LuxN from Vibrio harveyi. The notes should mention that figure 2 shows that AinR is functionally similar to LuxN from v. harveyi and responsds to the C8-AHL produced in the vibrio fischeri.

1
ChallengeZach.Bailey,
Team Not Very Creative
2016-03-30 18:49:31 CDT

Since bioluminescence is increased with the addition of C8-AHL, the evidence code should be IGI with/from VIBF1:Q5E614.

2
Private
Assessment
Suzialeksander2016-06-13 15:26:07 CDTYou need to be an instructor to view these notes.Updated by Instructor
Private
Assessment
Suzialeksander2016-05-09 19:40:48 CDTYou need to be an instructor to view these notes.Corrected Through Challenges
Protein
Publication
Qualifier
Go term
Evidence
With/From
Notes
Unique/Original
Public
Assessment
Suzialeksander2016-05-09 19:27:59 CDT

cqsS source was determined how? Flagged on cqsS accession.

Flagged
With/From
Public
Assessment
DanielRenfro2016-04-13 10:12:11 CDT

This annotation has been flagged because it has been challenged since last assessment

Flagged
Private
Assessment
Suzialeksander2016-04-12 17:45:29 CDTYou need to be an instructor to view these notes.Requires Changes
Private
Assessment
Suzialeksander2016-04-12 17:29:26 CDTYou need to be an instructor to view these notes.Requires Changes
Public
Assessment
Suzialeksander2016-04-06 21:27:40 CDT

IGI is right. Still two more issues to fix...

Requires Changes
With/From
Private
Assessment
Suzialeksander2016-04-06 21:26:51 CDTYou need to be an instructor to view these notes.Requires Changes
Protein
Publication
Qualifier
Go term
Evidence
With/From
Notes
Unique/Original
Public
Assessment
DanielRenfro2016-04-05 15:50:46 CDT

This annotation has been flagged because it has been challenged since last assessment

Flagged
Private
Assessment
Suzialeksander2016-04-03 22:54:49 CDTYou need to be an instructor to view these notes.Requires Changes
Private
Assessment
Suzialeksander2016-04-03 22:53:32 CDTYou need to be an instructor to view these notes.Requires Changes
Protein
Publication
Qualifier
Go term
Evidence
With/From
Unique/Original