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SYNY3:GYRB

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Species (Taxon ID) Synechocystis sp. (strain PCC 6803 / Kazusa). (1111708)
Gene Name(s) gyrB
Protein Name(s) DNA gyrase subunit B

Ssp gyrB intein

External Links
UniProt P77966
EMBL BA000022
PIR S77162
RefSeq NP_441040.1
YP_005651097.1
YP_007450922.1
ProteinModelPortal P77966
DIP DIP-48809N
IntAct P77966
STRING 1148.sll2005
PaxDb P77966
PRIDE P77966
EnsemblBacteria BAA17720
GeneID 954353
KEGG syn:sll2005
PATRIC 23839370
eggNOG COG0187
HOGENOM HOG000075154
InParanoid P77966
KO K02470
OMA NARWREV
OrthoDB EOG6P334W
PhylomeDB P77966
Proteomes UP000001425
GO GO:0005694
GO:0005737
GO:0005524
GO:0003677
GO:0003918
GO:0046872
GO:0006265
GO:0016539
Gene3D 2.170.16.10
3.30.230.10
3.30.565.10
3.40.50.670
InterPro IPR002288
IPR011557
IPR003594
IPR028992
IPR003586
IPR003587
IPR006141
IPR020568
IPR014721
IPR001241
IPR013506
IPR013759
IPR013760
IPR018522
IPR006171
Pfam PF00204
PF00986
PF02518
PF01751
PRINTS PR00418
SMART SM00387
SM00305
SM00306
SM00433
SUPFAM SSF51294
SSF54211
SSF55874
SSF56719
TIGRFAMs TIGR01059
TIGR01443
TIGR01445
PROSITE PS50818
PS50817
PS00177
PS50880

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0006265

DNA topological change

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10424
PANTHER:PTN000018846
UniProtKB:Q9HUJ8

P

Seeded From UniProt

complete

enables

GO:0003918

DNA topoisomerase type II (ATP-hydrolyzing) activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10424
PANTHER:PTN000018846
UniProtKB:O67137
UniProtKB:P9WG45
UniProtKB:Q9HUJ8

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000565
InterPro:IPR001241
InterPro:IPR002288
InterPro:IPR011557
InterPro:IPR013506
InterPro:IPR013759
InterPro:IPR018522

F

Seeded From UniProt

complete

enables

GO:0003918

DNA topoisomerase type II (ATP-hydrolyzing) activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000565
InterPro:IPR001241
InterPro:IPR002288
InterPro:IPR011557
InterPro:IPR013506
InterPro:IPR013759
InterPro:IPR013760
InterPro:IPR018522

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000565
InterPro:IPR001241
InterPro:IPR002288
InterPro:IPR011557
InterPro:IPR013506
InterPro:IPR013759
InterPro:IPR013760
InterPro:IPR018522

F

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011557

C

Seeded From UniProt

complete

involved_in

GO:0006265

DNA topological change

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000565
InterPro:IPR001241
InterPro:IPR002288
InterPro:IPR011557
InterPro:IPR013506
InterPro:IPR013759
InterPro:IPR018522

P

Seeded From UniProt

complete

involved_in

GO:0016539

intein-mediated protein splicing

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006141

P

Seeded From UniProt

complete

enables

GO:0003918

DNA topoisomerase type II (ATP-hydrolyzing) activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:5.99.1.3

F

Seeded From UniProt

complete

enables

GO:0061505

DNA topoisomerase II activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:5.99.1.3

F

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0067

F

Seeded From UniProt

complete

enables

GO:0003916

DNA topoisomerase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0799

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

enables

GO:0016853

isomerase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0413

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page