GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

SYNY3:CYC6

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Synechocystis sp. (strain PCC 6803 / Kazusa). (1111708)
Gene Name(s) petJ
Protein Name(s) Cytochrome c6

Cytochrome c-553 Cytochrome c553 Soluble cytochrome f

External Links
UniProt P46445
EMBL L25252
BA000022
PIR A53328
RefSeq NP_440674.1
YP_005650733.1
YP_007450557.1
ProteinModelPortal P46445
SMR P46445
STRING 1148.sll1796
PaxDb P46445
EnsemblBacteria BAA17354
GeneID 953977
KEGG syn:sll1796
PATRIC 23838554
eggNOG COG2010
HOGENOM HOG000254790
InParanoid P46445
KO K08906
OMA CHAGGKN
OrthoDB EOG6ZPT4G
PhylomeDB P46445
Proteomes UP000001425
GO GO:0031977
GO:0009055
GO:0020037
GO:0005506
GO:0055114
GO:0015979
Gene3D 1.10.760.10
HAMAP MF_00594
InterPro IPR009056
IPR023655
IPR008168
Pfam PF13442
PRINTS PR00605
SUPFAM SSF46626
PROSITE PS51007

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0009773

photosynthetic electron transport chain

PMID:14660567[1]

ECO:0000315

P

Fig. 4, Fig. 6

complete

involved_in

GO:0009773

photosynthetic electron transport in photosystem I

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002857373
UniProtKB:P46445

P

Seeded From UniProt

complete

enables

GO:0005506

iron ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR008168
InterPro:IPR023655

F

Seeded From UniProt

complete

enables

GO:0009055

electron transfer activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR008168
InterPro:IPR009056
InterPro:IPR023655
InterPro:IPR036909

F

Seeded From UniProt

complete

enables

GO:0020037

heme binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR009056
InterPro:IPR036909

F

Seeded From UniProt

complete

involved_in

GO:0015979

photosynthesis

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000098110

P

Seeded From UniProt

complete

part_of

GO:0031977

thylakoid lumen

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000098110

C

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000098110

P

Seeded From UniProt

complete

enables

GO:0009055

electron transfer activity

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000098110

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0249

P

Seeded From UniProt

complete

involved_in

GO:0015979

photosynthesis

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0602

P

Seeded From UniProt

complete

part_of

GO:0009579

thylakoid

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0793

C

Seeded From UniProt

complete

part_of

GO:0031977

thylakoid lumen

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0044

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Durán, RV et al. (2004) The efficient functioning of photosynthesis and respiration in Synechocystis sp. PCC 6803 strictly requires the presence of either cytochrome c6 or plastocyanin. J. Biol. Chem. 279 7229-33 PubMed GONUTS page
  2. Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page