GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

SYNY3:CY550

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Synechocystis sp. (strain PCC 6803 / Kazusa). (1111708)
Gene Name(s) psbV (ECO:0000255 with HAMAP-Rule:MF_01378) (synonyms: petK)
Protein Name(s) Cytochrome c-550 (ECO:0000255 with HAMAP-Rule:MF_01378)

Cytochrome c549 Cytochrome c550 (ECO:0000255 with HAMAP-Rule:MF_01378) Low-potential cytochrome c (ECO:0000255 with HAMAP-Rule:MF_01378)

External Links
UniProt Q55013
EMBL D45178
BA000022
U07021
PIR A56189
RefSeq NP_441834.1
YP_005651894.1
YP_007451715.1
PDB 1E29
PDBsum 1E29
ProteinModelPortal Q55013
SMR Q55013
IntAct Q55013
STRING 1148.sll0258
PaxDb Q55013
EnsemblBacteria BAA18512
GeneID 954270
KEGG syn:sll0258
PATRIC 23841184
eggNOG NOG13404
HOGENOM HOG000276786
InParanoid Q55013
KO K02720
OMA TKTNQNV
OrthoDB EOG69D3CT
BioCyc MetaCyc:PSBV-MONOMER
EvolutionaryTrace Q55013
Proteomes UP000001425
GO GO:0030096
GO:0042651
GO:0009055
GO:0020037
GO:0005506
GO:0018063
GO:0019684
GO:0022904
Gene3D 1.10.760.10
HAMAP MF_01378
InterPro IPR009056
IPR029490
IPR016003
IPR017851
Pfam PF14495
PIRSF PIRSF005890
SUPFAM SSF46626
TIGRFAMs TIGR03045
PROSITE PS51007

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0030096

plasma membrane-derived thylakoid photosystem II

PMID:12069591[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0005506

iron ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR016003

F

Seeded From UniProt

complete

enables

GO:0009055

electron transfer activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR009056
InterPro:IPR036909

F

Seeded From UniProt

complete

part_of

GO:0009523

photosystem II

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR016003
InterPro:IPR017851

C

Seeded From UniProt

complete

involved_in

GO:0015979

photosynthesis

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR016003
InterPro:IPR017851

P

Seeded From UniProt

complete

enables

GO:0020037

heme binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR009056
InterPro:IPR016003
InterPro:IPR017851
InterPro:IPR036909

F

Seeded From UniProt

complete

involved_in

GO:0022904

respiratory electron transport chain

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR016003

P

Seeded From UniProt

complete

part_of

GO:0042651

thylakoid membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017851

C

Seeded From UniProt

complete

involved_in

GO:0018063

cytochrome c-heme linkage

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000076215

P

Seeded From UniProt

complete

involved_in

GO:0019684

photosynthesis, light reaction

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000076215

P

Seeded From UniProt

complete

part_of

GO:0042651

thylakoid membrane

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000076215

C

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0249

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

involved_in

GO:0015979

photosynthesis

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0602

P

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

part_of

GO:0009523

photosystem II

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0604

C

Seeded From UniProt

complete

part_of

GO:0009579

thylakoid

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0793

C

Seeded From UniProt

complete

part_of

GO:0042651

thylakoid membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0045

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Kashino, Y et al. (2002) Proteomic analysis of a highly active photosystem II preparation from the cyanobacterium Synechocystis sp. PCC 6803 reveals the presence of novel polypeptides. Biochemistry 41 8004-12 PubMed GONUTS page