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SYNE7:KAIC
Contents
Species (Taxon ID) | Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2). (1140) | |
Gene Name(s) | kaiC | |
Protein Name(s) | Circadian clock protein kinase KaiC | |
External Links | ||
UniProt | Q79PF4 | |
EMBL | AB010691 AY120853 CP000100 | |
PIR | T44269 | |
RefSeq | YP_400233.1 | |
PDB | 1TF7 1U9I 2GBL 3DVL 3JZM 3K09 3K0A 3K0C 3K0E 3K0F 3S1A 4DUG 4IJM | |
PDBsum | 1TF7 1U9I 2GBL 3DVL 3JZM 3K09 3K0A 3K0C 3K0E 3K0F 3S1A 4DUG 4IJM | |
ProteinModelPortal | Q79PF4 | |
SMR | Q79PF4 | |
DIP | DIP-33330N | |
IntAct | Q79PF4 | |
MINT | MINT-8094424 | |
STRING | 1140.Synpcc7942_1216 | |
PhosSite | P0501119 | |
EnsemblBacteria | ABB57246 | |
GeneID | 3773504 | |
KEGG | syf:Synpcc7942_1216 | |
PATRIC | 23787739 | |
eggNOG | COG0467 | |
HOGENOM | HOG000230416 | |
KO | K08482 | |
OrthoDB | EOG6ZPSVX | |
BioCyc | SYNEL:SYNPCC7942_1216-MONOMER | |
EvolutionaryTrace | Q79PF4 | |
Proteomes | UP000002717 | |
GO | GO:0005524 GO:0003677 GO:0042802 GO:0000287 GO:0004674 GO:0004712 GO:0007623 GO:0009649 GO:0042754 GO:0070297 GO:0006355 GO:0006351 | |
Gene3D | 3.40.50.300 | |
HAMAP | MF_01836 | |
InterPro | IPR014774 IPR013503 IPR010624 IPR027417 | |
Pfam | PF06745 | |
SUPFAM | SSF52540 | |
TIGRFAMs | TIGR02655 | |
PROSITE | PS51146 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0070297 |
regulation of two-component signal transduction system (phosphorelay) |
ECO:0000314 |
P |
Figure 3a,b |
complete | |||||
GO:0070297 |
regulation of two-component signal transduction system (phosphorelay) |
ECO:0000314 |
P |
SI Appendix Fig. S6 |
complete | |||||
GO:0042754 |
negative regulation of circadian rhythm |
ECO:0000315 |
P |
Figure 2, Figure 4F |
complete | |||||
GO:0032922 |
circadian regulation of gene expression |
ECO:0000315 |
P |
Figure 1A. and 1B, KiaABC complex help regulate the circadian rhythms by gene expressing of wild type compared to a null mutant. |
complete | |||||
involved_in |
GO:0070297 |
regulation of phosphorelay signal transduction system |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042754 |
negative regulation of circadian rhythm |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009649 |
entrainment of circadian clock |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006468 |
protein phosphorylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004674 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006468 |
protein phosphorylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004712 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006468 |
protein phosphorylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004674 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0000287 |
magnesium ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004674 |
protein serine/threonine kinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042752 |
regulation of circadian rhythm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0000287 |
magnesium ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000085098 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000085098 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007623 |
circadian rhythm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000085098 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0004712 |
protein serine/threonine/tyrosine kinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000085098 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042754 |
negative regulation of circadian rhythm |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016301 |
kinase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016310 |
phosphorylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004674 |
protein serine/threonine kinase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048511 |
rhythmic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Takai, N et al. (2006) A KaiC-associating SasA-RpaA two-component regulatory system as a major circadian timing mediator in cyanobacteria. Proc. Natl. Acad. Sci. U.S.A. 103 12109-14 PubMed GONUTS page
- ↑ Chang, YG et al. (2011) Flexibility of the C-terminal, or CII, ring of KaiC governs the rhythm of the circadian clock of cyanobacteria. Proc. Natl. Acad. Sci. U.S.A. 108 14431-6 PubMed GONUTS page
- ↑ 3.0 3.1 Ishiura, M et al. (1998) Expression of a gene cluster kaiABC as a circadian feedback process in cyanobacteria. Science 281 1519-23 PubMed GONUTS page
- ↑ Ito, H et al. (2009) Cyanobacterial daily life with Kai-based circadian and diurnal genome-wide transcriptional control in Synechococcus elongatus. Proc. Natl. Acad. Sci. U.S.A. 106 14168-73 PubMed GONUTS page
- ↑ 5.0 5.1 Iwasaki, H et al. (1999) Physical interactions among circadian clock proteins KaiA, KaiB and KaiC in cyanobacteria. EMBO J. 18 1137-45 PubMed GONUTS page
- ↑ Abe, J et al. (2015) Circadian rhythms. Atomic-scale origins of slowness in the cyanobacterial circadian clock. Science 349 312-6 PubMed GONUTS page
- ↑ Qin, X et al. (2010) Intermolecular associations determine the dynamics of the circadian KaiABC oscillator. Proc. Natl. Acad. Sci. U.S.A. 107 14805-10 PubMed GONUTS page
- ↑ Wood, TL et al. (2010) The KaiA protein of the cyanobacterial circadian oscillator is modulated by a redox-active cofactor. Proc. Natl. Acad. Sci. U.S.A. 107 5804-9 PubMed GONUTS page
- ↑ Taniguchi, Y et al. (2001) Two KaiA-binding domains of cyanobacterial circadian clock protein KaiC. FEBS Lett. 496 86-90 PubMed GONUTS page
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