STRCO:RNC

Species (Taxon ID)	Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145). (100226)
Gene Name(s)	rnc (synonyms: absB)
Protein Name(s)	Ribonuclease 3 Antibiotic biosynthesis protein B AbsB Ribonuclease III RNase III
External Links
UniProt	Q9ZBQ7
EMBL	AL939124
PIR	T35656
RefSeq	NP_629707.1
SMR	Q9ZBQ7
STRING	100226.SCO5572
PRIDE	Q9ZBQ7
EnsemblBacteria	CAA22415
GeneID	1101013
KEGG	sco:SCO5572
PATRIC	fig|100226.15.peg.5661
eggNOG	ENOG4108ZBM COG0571
HOGENOM	HOG000246808
InParanoid	Q9ZBQ7
KO	K03685
OrthoDB	POG091H00R1
BRENDA	3.1.26.3
Proteomes	UP000001973
GO	GO:0005737 GO:0003725 GO:0046872 GO:0004525 GO:0019843 GO:0006397 GO:0090502 GO:0006396 GO:0016075 GO:0006364 GO:0008033
CDD	cd00593
Gene3D	1.10.1520.10
HAMAP	MF_00104
InterPro	IPR014720 IPR011907 IPR000999 IPR036389
Pfam	PF00035 PF14622
SMART	SM00358 SM00535
SUPFAM	SSF69065
TIGRFAMs	TIGR02191
PROSITE	PS50137 PS00517 PS50142

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
	GO:0017000	antibiotic biosynthetic process	PMID:10498729	ECO:0000314			P		Figure 2. shows the PCR primers A and D in the experiment. They were used to make a absB gene template from the wild-type and mutant strains (shown in table 1). The primers were inserted into an E. coli replicon, pBluescript SK(+) (pBK802 to pBK804 and pRK805), in order to be sequences with normal primers and reversed primers. The results of the experiment show that the abs gene encodes the S. coelicolor homolog of RNase III. Also, through a series of processes, absB mutant can be transformed in the wild-type Abs+ when using a gene homologous to the wild-type RNAse III.	complete CACAO 13183
involved_in	GO:0006396	RNA processing		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	EcoGene:EG10857 PANTHER:PTN000129453	P		Seeded From UniProt	complete
enables	GO:0004525	ribonuclease III activity		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	EcoGene:EG10857 PANTHER:PTN000129453 PomBase:SPBC119.11c SGD:S000004852 UniProtKB:Q9NRR4 WB:WBGene00009163	F		Seeded From UniProt	complete
enables	GO:0003725	double-stranded RNA binding		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000129453 PomBase:SPBC119.11c TAIR:locus:2024407 UniProtKB:A6YSL1 UniProtKB:Q0IQN6	F		Seeded From UniProt	complete
involved_in	GO:0090305	nucleic acid phosphodiester bond hydrolysis	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004519	P		Seeded From UniProt	complete
involved_in	GO:0090305	nucleic acid phosphodiester bond hydrolysis	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004518	P		Seeded From UniProt	complete
involved_in	GO:0090501	RNA phosphodiester bond hydrolysis	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004525	P		Seeded From UniProt	complete
involved_in	GO:0090501	RNA phosphodiester bond hydrolysis	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004525	P		Seeded From UniProt	complete
involved_in	GO:0090501	RNA phosphodiester bond hydrolysis	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0004525	P		Seeded From UniProt	complete
involved_in	GO:0090501	RNA phosphodiester bond hydrolysis	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004525	P		Seeded From UniProt	complete
involved_in	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004525	P		Seeded From UniProt	complete
involved_in	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004525	P		Seeded From UniProt	complete
involved_in	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0004525	P		Seeded From UniProt	complete
involved_in	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004525	P		Seeded From UniProt	complete
enables	GO:0003723	RNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR011907	F		Seeded From UniProt	complete
enables	GO:0004525	ribonuclease III activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000999 InterPro:IPR011907 InterPro:IPR036389	F		Seeded From UniProt	complete
involved_in	GO:0006396	RNA processing	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000999 InterPro:IPR036389	P		Seeded From UniProt	complete
involved_in	GO:0016075	rRNA catabolic process	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR011907	P		Seeded From UniProt	complete
enables	GO:0004525	ribonuclease III activity	GO_REF:0000003	ECO:0000501	evidence used in automatic assertion	EC:3.1.26.3	F		Seeded From UniProt	complete
involved_in	GO:0006364	rRNA processing	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000076502	P		Seeded From UniProt	complete
involved_in	GO:0006397	mRNA processing	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000076502	P		Seeded From UniProt	complete
enables	GO:0004525	ribonuclease III activity	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000076502	F		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000104	ECO:0000256	match to sequence model evidence used in automatic assertion	UniRule:UR000076502	C		Seeded From UniProt	complete
enables	GO:0003723	RNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0694	F		Seeded From UniProt	complete
enables	GO:0019843	rRNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0699	F		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0963 UniProtKB-SubCell:SL-0086	C		Seeded From UniProt	complete
involved_in	GO:0008033	tRNA processing	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0819	P		Seeded From UniProt	complete
involved_in	GO:0006364	rRNA processing	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0698	P		Seeded From UniProt	complete
enables	GO:0004519	endonuclease activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0255	F		Seeded From UniProt	complete
enables	GO:0046872	metal ion binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0479	F		Seeded From UniProt	complete
enables	GO:0004518	nuclease activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0540	F		Seeded From UniProt	complete
enables	GO:0016787	hydrolase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0378	F		Seeded From UniProt	complete
involved_in	GO:0006397	mRNA processing	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0507	P		Seeded From UniProt	complete
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References

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