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STRCO:REDD
Contents
Species (Taxon ID) | Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145). (100226) | |
Gene Name(s) | redD | |
Protein Name(s) | Transcriptional regulator RedD | |
External Links | ||
UniProt | P16922 | |
EMBL | M29790 AL939125 | |
PIR | T34829 | |
RefSeq | NP_629999.1 WP_011030508.1 | |
ProteinModelPortal | P16922 | |
STRING | 100226.SCO5877 | |
EnsemblBacteria | CAA16486 | |
GeneID | 1101319 | |
KEGG | sco:SCO5877 | |
PATRIC | 23741658 | |
eggNOG | COG3629 | |
InParanoid | P16922 | |
OMA | RERITEM | |
OrthoDB | EOG6RVG11 | |
PhylomeDB | P16922 | |
Proteomes | UP000001973 | |
GO | GO:0003677 GO:0017000 GO:0000160 GO:0006355 GO:0006351 | |
InterPro | IPR005158 IPR001867 IPR016032 | |
Pfam | PF03704 PF00486 | |
SMART | SM01043 | |
SUPFAM | SSF46894 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0017000 |
antibiotic biosynthetic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002441676 |
P |
Seeded From UniProt |
complete | ||
GO:0017000 |
antibiotic biosynthetic process |
ECO:0000314 |
P |
Fig 4A. After 65h, the yield of undecylprodigiosin from M145(pIJ6014) (6.1ug/ml) was 5.5 times higher than that from M145 (1.1 ug/ml), showing the increase in antibiotic production. |
complete | |||||
enables |
GO:0003677 |
DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002441676 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0017000 |
antibiotic biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Takano, E et al. (1992) Transcriptional regulation of the redD transcriptional activator gene accounts for growth-phase-dependent production of the antibiotic undecylprodigiosin in Streptomyces coelicolor A3(2). Mol. Microbiol. 6 2797-804 PubMed GONUTS page
- ↑ 2.0 2.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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