GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

STAEQ:SAER

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Staphylococcus epidermidis (strain ATCC 35984 / RP62A). (176279)
Gene Name(s) saeR
Protein Name(s) Response regulator SaeR
External Links
UniProt Q5HR28
EMBL CP000029
RefSeq YP_187961.1
ProteinModelPortal Q5HR28
STRING 176279.SERP0365
EnsemblBacteria AAW53763
GeneID 3241745
KEGG ser:SERP0365
PATRIC 19611599
eggNOG COG0745
HOGENOM HOG000034819
KO K10682
OMA KDYLAMN
OrthoDB EOG6G4VQG
BioCyc SEPI176279:GJJB-385-MONOMER
Proteomes UP000000531
GO GO:0005737
GO:0003677
GO:0000160
GO:0006355
GO:0006351
Gene3D 1.10.10.10
InterPro IPR011006
IPR001867
IPR001789
IPR011991
Pfam PF00072
PF00486
SMART SM00448
SM00862
SUPFAM SSF52172
PROSITE PS50110

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0009386

translational attenuation

PMID:24592198[1]

ECO:0000314

P

Figure 4: the biofilm forming ability of WT showed no obvious difference upon the stimulation of glucose. Although it did not reach the level of the wild-type strain, complementation of saeRS resulted in decreased biofilm formation.

complete
CACAO 9966

GO:0009386

translational attenuation

PMID:24592198[1]

ECO:0000315

P

Figure 4: the biofilm forming ability of WT showed no obvious difference upon the stimulation of glucose. Although it did not reach the level of the wild-type strain, complementation of saeRS resulted in decreased biofilm formation.

complete
CACAO 10044

involved_in

GO:0010468

regulation of gene expression

PMID:24592198[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

GO:0010468

regulation of gene expression

PMID:24592198[1]

ECO:0000314

P

Figure 3: To verify the differentially expressed proteins regulated by SaeRS at the transcriptional level, glucose metabolism-related genes were chosen for the quantitative real-time RT-PCR analysis. The phosphate acetyltransferase transcription expression levels were significantly upregulated 1.72-fold over than those of the control.

complete
CACAO 10045

involved_in

GO:0000160

phosphorelay signal transduction system

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001789
InterPro:IPR001867

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001867

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001867

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

involved_in

GO:0000160

phosphorelay signal transduction system

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0902

P

Seeded From UniProt

complete

involved_in

GO:0050896

response to stimulus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0716

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Lou, Q et al. (2014) Two-component signal transduction system SaeRS positively regulates Staphylococcus epidermidis glucose metabolism. ScientificWorldJournal 2014 908121 PubMed GONUTS page