GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

SOYBN:C7SQI9

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Glycine max (Soybean) (Glycine hispida). (3847)
Gene Name(s) PTF1 (ECO:0000313 with EMBL:ACU52707.1)
Protein Name(s) BHLH transcription factor PTF1 (ECO:0000313 with EMBL:ACU52707.1)
External Links
UniProt C7SQI9
EMBL FJ617239
RefSeq NP_001242250.1
UniGene Gma.17872
GeneID 100795486
KEGG gmx:100795486
Gene3D 4.10.280.10
InterPro IPR011598
Pfam PF00010
SMART SM00353
SUPFAM SSF47459
PROSITE PS50888

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0044798

nuclear transcription factor complex

PMID:24634113[1]

ECO:0000315

C

Figure 5: Shows that GmPTF1 is located in the nucleus Figure 6: Used yeast clones and beta-galactosidase assays to show that the N-terminal and C-terminal domains of the full GmPTF1 are used to activate transcription. Only when both are functional can the reporter genes for Ade, Ura and his be activated Figure 7: Shows via qRT-PCR that GmPTF1 expression was induced in soybean varieties more tolerant to phosphate starvation. Time point sampling of plant organs showed that phosphate starvation induced the expression in the tolerant plants. This shows that GmPTF1 is likely a transcription factor involved in phosphate starvation response.

complete
CACAO 9674

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR024097

P

Seeded From UniProt

complete

enables

GO:0046983

protein dimerization activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011598
InterPro:IPR036638

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Li, XH et al. (2014) GmPTF1, a novel transcription factor gene, is involved in conferring soybean tolerance to phosphate starvation. Genet. Mol. Res. 13 926-37 PubMed GONUTS page