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SHEON:Q8E8S0
Contents
| Species (Taxon ID) | Shewanella oneidensis (strain MR-1). (211586) | |
| Gene Name(s) | cymA (ECO:0000313 with EMBL:AAN57551.1) | |
| Protein Name(s) | Cytochrome c-type protein (ECO:0000256 with PIRNR:PIRNR000013) | |
| External Links | ||
| UniProt | Q8E8S0 | |
| EMBL | AE014299 | |
| RefSeq | NP_720107.1 | |
| ProteinModelPortal | Q8E8S0 | |
| STRING | 211586.SO_4591 | |
| TCDB | 5.B.5.1.1 | |
| EnsemblBacteria | AAN57551 | |
| GeneID | 1172176 | |
| KEGG | son:SO_4591 | |
| PATRIC | 23528849 | |
| HOGENOM | HOG000275532 | |
| OMA | TSTDEFC | |
| OrthoDB | EOG65J523 | |
| PhylomeDB | Q8E8S0 | |
| Proteomes | UP000008186 | |
| GO | GO:0016021 GO:0020037 GO:0046872 GO:0008940 GO:0000104 GO:0019333 | |
| InterPro | IPR011031 IPR024717 IPR005126 | |
| Pfam | PF03264 | |
| PIRSF | PIRSF000013 | |
| PROSITE | PS51008 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0009233 |
menaquinone metabolic process |
ECO:0000314 |
P |
Figure 4 displays menaquinol binding activity, thus playing a role in menaquionone processes. |
complete | |||||
|
enables |
GO:0008940 |
nitrate reductase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000104 |
succinate dehydrogenase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11815 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009061 |
anaerobic respiration |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11815 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0009055 |
electron transfer activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11815 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0022900 |
electron transport chain |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0009055 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0019333 |
denitrification pathway |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0020037 |
heme binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Marritt, SJ et al. (2012) A functional description of CymA, an electron-transfer hub supporting anaerobic respiratory flexibility in Shewanella. Biochem. J. 444 465-74 PubMed GONUTS page
- ↑ 2.0 2.1 Myers, CR & Myers, JM (1997) Cloning and sequence of cymA, a gene encoding a tetraheme cytochrome c required for reduction of iron(III), fumarate, and nitrate by Shewanella putrefaciens MR-1. J. Bacteriol. 179 1143-52 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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