GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

SCHPO:MIS4

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast). (284812)
Gene Name(s) mis4
Protein Name(s) Sister chromatid cohesion protein mis4

SCC2 homolog

External Links
UniProt Q09725
EMBL AB016866
CU329670
PIR T38603
RefSeq NP_592917.2
BioGrid 279111
DIP DIP-60691N
IntAct Q09725
STRING 4896.SPAC31A2.05c.1
iPTMnet Q09725
MaxQB Q09725
PaxDb Q09725
PRIDE Q09725
EnsemblFungi SPAC31A2.05c.1
GeneID 2542657
KEGG spo:SPAC31A2.05c
EuPathDB FungiDB:SPAC31A2.05c
PomBase SPAC31A2.05c
InParanoid Q09725
KO K06672
OMA KQGLAHP
PRO PR:Q09725
Proteomes UP000002485
GO GO:0000785
GO:0005829
GO:0000790
GO:0000228
GO:0005634
GO:0090694
GO:0032116
GO:0003682
GO:0003690
GO:0006302
GO:0034087
GO:0071169
GO:0007076
GO:0061780
GO:0062022
GO:0007064
GO:0000070
GO:0034184
GO:1905406
GO:0070550
GO:1990414
GO:0071733
InterPro IPR016024
IPR026003
IPR024986
IPR033031
PANTHER PTHR21704
Pfam PF12765
PF12830
SUPFAM SSF48371

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0032116

cohesin loading complex

ECO:0000315

C

Source: GeneDB_SPombe

Missing: reference

GO:0000794

condensed nuclear chromosome

ECO:0000305

C

Source: GeneDB_SPombe

Missing: with/from, reference

GO:0005829

cytosol

ECO:0000314

C

Source: GeneDB_SPombe

Missing: reference

GO:0030892

mitotic cohesin complex

ECO:0000314

C

Source: GeneDB_SPombe

Missing: reference

GO:0005515

protein binding

ECO:0000021

F

Source: GeneDB_SPombe

Missing: with/from, reference

GO:0008608

attachment of spindle microtubules to kinet...

ECO:0000315

P

Source: GeneDB_SPombe

Missing: reference

GO:0007064

mitotic sister chromatid cohesion

ECO:0000315

P

Source: GeneDB_SPombe

Missing: reference

GO:0034184

positive regulation of maintenance of mitot...

ECO:0000315

P

Source: GeneDB_SPombe

Missing: reference

GO:0000084

S phase of mitotic cell cycle

ECO:0000315

P

Source: GeneDB_SPombe

Missing: reference

involved_in

GO:1905406

positive regulation of mitotic cohesin loading

PMID:26687354[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

GO:0000084

S phase of mitotic cell cycle

PMID:9808627[2]

ECO:0000315

P

complete

involved_in

GO:1905406

positive regulation of mitotic cohesin loading

PMID:24291789[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0090694

Scc2-Scc4 cohesin loading complex

PMID:26687354[1]

ECO:0000269

experimental evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0062022

mitotic cohesin ssDNA (lagging strand) loading

PMID:29358048[4]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0061780

mitotic cohesin loading

PMID:26583750[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

GO:0005515

protein binding

PMID:16682348[6]

ECO:0000021

GeneDB_Spombe:SPAC1687.18c

F

complete

involved_in

GO:0034184

positive regulation of maintenance of mitotic sister chromatid cohesion

PMID:18079700[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

happens_during:(GO:0000080)

Seeded From UniProt

complete

GO:0005634

nucleus

GO_REF:0000001

ECO:0000305

GO:0007062

C

complete

part_of

GO:0032116

SMC loading complex

PMID:24291789[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0032116

SMC loading complex

PMID:16682348[6]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:16823372[8]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:16823372[8]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003690

double-stranded DNA binding

PMID:24291789[3]

ECO:0000314

direct assay evidence used in manual assertion

F

part_of:(GO:1905406)

Seeded From UniProt

complete

GO:0005694

chromosome

PMID:9808627[2]

ECO:0000314

C

complete

part_of

GO:0000228

nuclear chromosome

PMID:9808627[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0000070

mitotic sister chromatid segregation

PMID:11882285[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0000070

mitotic sister chromatid segregation

PMID:10398680[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1990414

replication-born double-strand break repair via sister chromatid exchange

PMID:21873635[11]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000496017
SGD:S000002588

P

Seeded From UniProt

complete

involved_in

GO:1905406

positive regulation of mitotic cohesin loading

PMID:21873635[11]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000496017
PomBase:SPAC31A2.05c

P

Seeded From UniProt

complete

part_of

GO:0090694

Scc2-Scc4 cohesin loading complex

PMID:21873635[11]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000496017
PomBase:SPAC31A2.05c
UniProtKB:Q6KC79

C

Seeded From UniProt

complete

GO:0008608

attachment of spindle microtubules to kinetochore

PMID:11882285[9]

ECO:0000315

P

complete

involved_in

GO:0071733

transcriptional activation by promoter-enhancer looping

PMID:21873635[11]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0026401
PANTHER:PTN000496017
ZFIN:ZDB-GENE-030131-6070
ZFIN:ZDB-GENE-060526-121

P

Seeded From UniProt

complete

GO:0030892

mitotic cohesin complex

PMID:16682348[6]

ECO:0000314

C

complete

involved_in

GO:0071169

establishment of protein localization to chromatin

PMID:21873635[11]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000496017
SGD:S000002588

P

Seeded From UniProt

complete

GO:0032116

SMC loading complex

PMID:16682348[6]

ECO:0000315

C

complete

involved_in

GO:0070550

rDNA condensation

PMID:21873635[11]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000496017
SGD:S000002588

P

Seeded From UniProt

complete

GO:0034184

positive regulation of maintenance of mitotic sister chromatid cohesion

PMID:18079700[7]

ECO:0000315

P

complete

involved_in

GO:0034087

establishment of mitotic sister chromatid cohesion

PMID:21873635[11]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000496017
SGD:S000002588

P

Seeded From UniProt

complete

involved_in

GO:0007076

mitotic chromosome condensation

PMID:21873635[11]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000496017
SGD:S000002588

P

Seeded From UniProt

complete

involved_in

GO:0007064

mitotic sister chromatid cohesion

PMID:21873635[11]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0026401
PANTHER:PTN000496017
UniProtKB:Q6KC79

P

Seeded From UniProt

complete

involved_in

GO:0006302

double-strand break repair

PMID:21873635[11]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000496017
SGD:S000002588

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[11]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0026401
MGI:MGI:1913976
PANTHER:PTN000496017
SGD:S000002588
UniProtKB:Q6KC79

C

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

PMID:21873635[11]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0026401
MGI:MGI:1913976
PANTHER:PTN000496017

F

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:21873635[11]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000496017
SGD:S000002588

C

Seeded From UniProt

complete

part_of

GO:0000785

chromatin

PMID:21873635[11]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1913976
PANTHER:PTN000496017

C

Seeded From UniProt

complete

part_of

GO:0000228

nuclear chromosome

PMID:21873635[11]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000496017
PomBase:SPAC31A2.05c

C

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033031

F

Seeded From UniProt

complete

involved_in

GO:0010468

regulation of gene expression

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033031

P

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0158
UniProtKB-SubCell:SL-0468

C

Seeded From UniProt

complete

involved_in

GO:0007049

cell cycle

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0131

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Murayama, Y & Uhlmann, F (2015) DNA Entry into and Exit out of the Cohesin Ring by an Interlocking Gate Mechanism. Cell 163 1628-40 PubMed GONUTS page
  2. 2.0 2.1 2.2 Furuya, K et al. (1998) Faithful anaphase is ensured by Mis4, a sister chromatid cohesion molecule required in S phase and not destroyed in G1 phase. Genes Dev. 12 3408-18 PubMed GONUTS page
  3. 3.0 3.1 3.2 Murayama, Y & Uhlmann, F (2014) Biochemical reconstitution of topological DNA binding by the cohesin ring. Nature 505 367-71 PubMed GONUTS page
  4. Murayama, Y et al. (2018) Establishment of DNA-DNA Interactions by the Cohesin Ring. Cell 172 465-477.e15 PubMed GONUTS page
  5. Çamdere, G et al. (2015) The ATPases of cohesin interface with regulators to modulate cohesin-mediated DNA tethering. Elife 4 PubMed GONUTS page
  6. 6.0 6.1 6.2 6.3 Bernard, P et al. (2006) A screen for cohesion mutants uncovers Ssl3, the fission yeast counterpart of the cohesin loading factor Scc4. Curr. Biol. 16 875-81 PubMed GONUTS page
  7. 7.0 7.1 Bernard, P et al. (2008) Cell-cycle regulation of cohesin stability along fission yeast chromosomes. EMBO J. 27 111-21 PubMed GONUTS page
  8. 8.0 8.1 Matsuyama, A et al. (2006) ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 24 841-7 PubMed GONUTS page
  9. 9.0 9.1 Toyoda, Y et al. (2002) Requirement of chromatid cohesion proteins rad21/scc1 and mis4/scc2 for normal spindle-kinetochore interaction in fission yeast. Curr. Biol. 12 347-58 PubMed GONUTS page
  10. Goshima, G et al. (1999) Proper metaphase spindle length is determined by centromere proteins Mis12 and Mis6 required for faithful chromosome segregation. Genes Dev. 13 1664-77 PubMed GONUTS page
  11. 11.00 11.01 11.02 11.03 11.04 11.05 11.06 11.07 11.08 11.09 11.10 11.11 11.12 11.13 11.14 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page