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SCHPO:HUB1
Contents
| Species (Taxon ID) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast). (284812) | |
| Gene Name(s) | hub1 (synonyms: ubl4) | |
| Protein Name(s) | Ubiquitin-like modifier hub1 | |
| External Links | ||
| UniProt | O94650 | |
| EMBL | CU329671 | |
| PIR | T40200 | |
| RefSeq | NP_595099.1 | |
| ProteinModelPortal | O94650 | |
| SMR | O94650 | |
| BioGrid | 276917 | |
| IntAct | O94650 | |
| STRING | 4896.SPBC31E1.03.1 | |
| MaxQB | O94650 | |
| PaxDb | O94650 | |
| PRIDE | O94650 | |
| EnsemblFungi | SPBC31E1.03.1 | |
| GeneID | 2540389 | |
| KEGG | spo:SPBC31E1.03 | |
| EuPathDB | FungiDB:SPBC31E1.03 | |
| PomBase | SPBC31E1.03 | |
| HOGENOM | HOG000234933 | |
| InParanoid | O94650 | |
| KO | K13113 | |
| OMA | CNEDDTV | |
| PhylomeDB | O94650 | |
| PRO | PR:O94650 | |
| Proteomes | UP000002485 | |
| GO | GO:0005737 GO:0005829 GO:0005634 GO:0031386 GO:0006464 GO:0045292 GO:0000398 | |
| InterPro | IPR039732 IPR029071 IPR000626 | |
| PANTHER | PTHR13042 | |
| Pfam | PF00240 | |
| SUPFAM | SSF54236 | |
| PROSITE | PS50053 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0045292 |
mRNA cis splicing, via spliceosome |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
PomBase:SPAC167.03c |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005829 |
cytosol |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0031386 |
protein tag |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000315756 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000315756 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000315756 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000398 |
mRNA splicing, via spliceosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000315756 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006464 |
cellular protein modification process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008380 |
RNA splicing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006397 |
mRNA processing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Yashiroda, H & Tanaka, K (2004) Hub1 is an essential ubiquitin-like protein without functioning as a typical modifier in fission yeast. Genes Cells 9 1189-97 PubMed GONUTS page
- ↑ 2.0 2.1 Matsuyama, A et al. (2006) ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 24 841-7 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
