GONUTS has been updated to MW1.29.2. Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

SCHPO:HUB1

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast). (284812)
Gene Name(s) hub1 (synonyms: ubl4)
Protein Name(s) Ubiquitin-like modifier hub1
External Links
UniProt O94650
EMBL CU329671
PIR T40200
RefSeq NP_595099.1
ProteinModelPortal O94650
SMR O94650
IntAct O94650
MINT MINT-4685855
STRING 4896.SPBC31E1.03-1
PaxDb O94650
EnsemblFungi [example_ID SPBC31E1.03.1]
GeneID 2540389
KEGG spo:SPBC31E1.03
PomBase SPBC31E1.03
eggNOG NOG326610
HOGENOM HOG000234933
KO K13113
OMA AQTGTKW
OrthoDB EOG4PVS8F
NextBio 20801516
GO GO:0005829
GO:0005634
GO:0034613
GO:0045292
GO:0016567
InterPro IPR000626
IPR019955
Pfam PF00240
SMART SM00213
PROSITE PS00299
PS50053

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005515

protein binding

PMID:15620657[1]

IPI: Inferred from Physical Interaction

PomBase:SPAC167.03c

F

Seeded From UniProt

GO:0005515

protein binding

PMID:15620657[1]

IPI: Inferred from Physical Interaction

UniProtKB:O94538

F

Seeded From UniProt

GO:0005634

nucleus

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0539

C

Seeded From UniProt

GO:0005634

nucleus

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

GO:0005634

nucleus

PMID:15569151[2]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

GO:0005634

nucleus

PMID:16823372[3]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

GO:0005737

cytoplasm

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0963

C

Seeded From UniProt

GO:0005737

cytoplasm

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

GO:0005737

cytoplasm

PMID:15569151[2]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

GO:0005829

cytosol

PMID:16823372[3]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

GO:0006397

mRNA processing

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0507

P

Seeded From UniProt

GO:0008380

RNA splicing

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0508

P

Seeded From UniProt

GO:0016567

protein ubiquitination

GO_REF:0000001

ISM: Inferred from Sequence Model

Pfam:PF00240

P

Seeded From UniProt

GO:0034613

cellular protein localization

PMID:15620657[1]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

GO:0045292

mRNA cis splicing, via spliceosome

PMID:15569151[2]

IGI: Inferred from Genetic Interaction

PomBase:SPAC167.03c

P

Seeded From UniProt

GO:0045292

mRNA cis splicing, via spliceosome

PMID:15620657[1]

IGI: Inferred from Genetic Interaction

PomBase:SPAC644.12

P

Seeded From UniProt

GO:0045292

mRNA cis splicing, via spliceosome

PMID:15620657[1]

IGI: Inferred from Genetic Interaction

PomBase:SPBC19C2.01

P

Seeded From UniProt


Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 Wilkinson, CR et al. (2004) Ubiquitin-like protein Hub1 is required for pre-mRNA splicing and localization of an essential splicing factor in fission yeast. Curr. Biol. 14 2283-8 PubMed GONUTS page
  2. 2.0 2.1 2.2 Yashiroda, H & Tanaka, K (2004) Hub1 is an essential ubiquitin-like protein without functioning as a typical modifier in fission yeast. Genes Cells 9 1189-97 PubMed GONUTS page
  3. 3.0 3.1 Matsuyama, A et al. (2006) ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 24 841-7 PubMed GONUTS page