GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

SCHPO:BIP

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast). (284812)
Gene Name(s) bip1 (synonyms: bip)
Protein Name(s) Endoplasmic reticulum chaperone BiP (ECO:0000305)

Immunoglobulin heavy chain-binding protein homolog (ECO:0000305) BiP (ECO:0000305)

External Links
UniProt P36604
EMBL X64416
CU329670
PIR S20877
T38155
RefSeq NP_593245.1
ProteinModelPortal P36604
SMR P36604
BioGrid 278306
ELM P36604
IntAct P36604
STRING 4896.SPAC22A12.15c.1
iPTMnet P36604
MaxQB P36604
PaxDb P36604
PRIDE P36604
EnsemblFungi SPAC22A12.15c.1
GeneID 2541815
KEGG spo:SPAC22A12.15c
EuPathDB FungiDB:SPAC22A12.15c
PomBase SPAC22A12.15c
HOGENOM HOG000228135
InParanoid P36604
KO K09490
OMA CVGVMQK
PhylomeDB P36604
Reactome R-SPO-3371453
PRO PR:P36604
Proteomes UP000002485
GO GO:0099021
GO:0005737
GO:0005783
GO:0034663
GO:0005788
GO:0016020
GO:0031965
GO:0005634
GO:0099020
GO:0005524
GO:0016887
GO:0042623
GO:0031072
GO:0051787
GO:0044183
GO:0051082
GO:0034605
GO:0034620
GO:0051085
GO:0030968
GO:0036498
GO:0042026
GO:0006986
GO:0030433
Gene3D 1.20.1270.10
2.60.34.10
InterPro IPR018181
IPR029048
IPR029047
IPR013126
PANTHER PTHR19375
Pfam PF00012
PRINTS PR00301
SUPFAM SSF100920
SSF100934
PROSITE PS00014
PS00297
PS00329
PS01036

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005783

endoplasmic reticulum

PMID:10641037[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

PMID:8227200[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0099021

cortical endoplasmic reticulum lumen

PMID:8227200[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0099020

perinuclear endoplasmic reticulum lumen

PMID:8227200[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0051082

unfolded protein binding

GO_REF:0000024

ECO:0000266

sequence orthology evidence used in manual assertion

SGD:S000003571

F

Seeded From UniProt

complete

involved_in

GO:0036498

IRE1-mediated unfolded protein response

PMID:23066505[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0031965

nuclear membrane

PMID:1373379[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0030433

ubiquitin-dependent ERAD pathway

GO_REF:0000024

ECO:0000266

sequence orthology evidence used in manual assertion

SGD:S000003571

P

Seeded From UniProt

complete

enables

GO:0016887

ATPase activity

GO_REF:0000024

ECO:0000266

sequence orthology evidence used in manual assertion

SGD:S000003571

F

Seeded From UniProt

complete

part_of

GO:0005788

endoplasmic reticulum lumen

PMID:1373379[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

PMID:16823372[5]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

PMID:22132152[6]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000111

ECO:0000305

curator inference used in manual assertion

GO:0016887

F

Seeded From UniProt

complete

enables

GO:0051787

misfolded protein binding

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95835
PANTHER:PTN002321897
RGD:2843
UniProtKB:P11021

F

Seeded From UniProt

complete

involved_in

GO:0051085

chaperone cofactor-dependent protein refolding

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10241
MGI:MGI:105384
PANTHER:PTN002321897

P

Seeded From UniProt

complete

enables

GO:0051082

unfolded protein binding

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10241
MGI:MGI:105384
PANTHER:PTN002321897
RGD:2843
RGD:621725
SGD:S000000004
SGD:S000000171
SGD:S000000905
SGD:S000001106
SGD:S000001556
SGD:S000002388
SGD:S000003571
SGD:S000003947
SGD:S000005153
UniProtKB:P0DMV8
UniProtKB:P0DMV9
UniProtKB:P11142
UniProtKB:P17066
UniProtKB:P34931
UniProtKB:P54652

F

Seeded From UniProt

complete

enables

GO:0044183

protein folding chaperone

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10241
PANTHER:PTN002321897
UniProtKB:P0DMV8
UniProtKB:P0DMV9

F

Seeded From UniProt

complete

enables

GO:0042623

ATPase activity, coupled

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:105384
PANTHER:PTN002321897
RGD:621725
UniProtKB:P0DMV8
UniProtKB:P0DMV9
UniProtKB:P17066

F

Seeded From UniProt

complete

involved_in

GO:0042026

protein refolding

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002321897
SGD:S000000004
SGD:S000000756
SGD:S000003806
UniProtKB:P0DMV8
UniProtKB:P0DMV9
UniProtKB:P11142
UniProtKB:P17066
UniProtKB:P34931
UniProtKB:P54652

P

Seeded From UniProt

complete

part_of

GO:0034663

endoplasmic reticulum chaperone complex

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95835
PANTHER:PTN001834223
UniProtKB:P11021

C

Seeded From UniProt

complete

involved_in

GO:0034620

cellular response to unfolded protein

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10241
PANTHER:PTN002321897
UniProtKB:P0DMV8

P

Seeded From UniProt

complete

involved_in

GO:0034605

cellular response to heat

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

CGD:CAL0000184706
PANTHER:PTN002321897
RGD:621725
SGD:S000000905
UniProtKB:A5I640
UniProtKB:P0DMV8
UniProtKB:P0DMV9
UniProtKB:P17066

P

Seeded From UniProt

complete

enables

GO:0031072

heat shock protein binding

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002321897
RGD:1311806
UniProtKB:K7NTP5
UniProtKB:O73885
UniProtKB:P0DMV8
UniProtKB:P0DMV9
UniProtKB:P11142
UniProtKB:P17066
UniProtKB:P34931
UniProtKB:Q8IB24

F

Seeded From UniProt

complete

involved_in

GO:0030968

endoplasmic reticulum unfolded protein response

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95835
PANTHER:PTN001834223
WB:WBGene00002007
WB:WBGene00002008

P

Seeded From UniProt

complete

involved_in

GO:0030433

ubiquitin-dependent ERAD pathway

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001834223
SGD:S000003571
TAIR:locus:2182783

P

Seeded From UniProt

complete

enables

GO:0016887

ATPase activity

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10241
EcoGene:EG12130
EcoGene:EG13653
PANTHER:PTN002321897
PomBase:SPAC664.11
RGD:621725
SGD:S000000004
SGD:S000000171
SGD:S000002388
SGD:S000003571
SGD:S000003806
SGD:S000005153
UniProtKB:P0DMV8
UniProtKB:P0DMV9
UniProtKB:P11021
UniProtKB:P11142
WB:WBGene00002005

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001834223
RGD:2843
UniProtKB:Q39043

C

Seeded From UniProt

complete

involved_in

GO:0006986

response to unfolded protein

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002321897
RGD:1593284
RGD:2840
SGD:S000001556
SGD:S000003571
UniProtKB:P0DMV8

P

Seeded From UniProt

complete

part_of

GO:0005788

endoplasmic reticulum lumen

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95835
PANTHER:PTN001834223
PomBase:SPAC22A12.15c

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10241
FB:FBgn0266599
MGI:MGI:105384
MGI:MGI:96244
PANTHER:PTN002321897
PomBase:SPCC1739.13
RGD:1311806
RGD:2843
RGD:621725
SGD:S000000004
SGD:S000000905
SGD:S000001106
SGD:S000002388
SGD:S000003947
UniProtKB:O73885
UniProtKB:P08106
UniProtKB:P0DMV8
UniProtKB:P0DMV9
UniProtKB:P17066
UniProtKB:P22953
UniProtKB:Q27975
UniProtKB:Q8IB24
WB:WBGene00002005

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001834223
UniProtKB:P11021
UniProtKB:Q39043

C

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

PMID:21873635[7]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10241
EcoGene:EG12130
PANTHER:PTN002321897
RGD:621725
SGD:S000001556
SGD:S000003947
TAIR:locus:2101222
TAIR:locus:2121022
TAIR:locus:2135897
TAIR:locus:2144801
UniProtKB:P08106
UniProtKB:P0DMV8
UniProtKB:P0DMV9
UniProtKB:P11142
UniProtKB:Q7SX63

F

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0067

F

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0256

C

Seeded From UniProt

complete

part_of

GO:0005788

endoplasmic reticulum lumen

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0096

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Brazer, SC et al. (2000) A fission yeast kinesin affects Golgi membrane recycling. Yeast 16 149-66 PubMed GONUTS page
  2. 2.0 2.1 2.2 Pidoux, AL & Armstrong, J (1993) The BiP protein and the endoplasmic reticulum of Schizosaccharomyces pombe: fate of the nuclear envelope during cell division. J. Cell. Sci. 105 ( Pt 4) 1115-20 PubMed GONUTS page
  3. Kimmig, P et al. (2012) The unfolded protein response in fission yeast modulates stability of select mRNAs to maintain protein homeostasis. Elife 1 e00048 PubMed GONUTS page
  4. 4.0 4.1 Pidoux, AL & Armstrong, J (1992) Analysis of the BiP gene and identification of an ER retention signal in Schizosaccharomyces pombe. EMBO J. 11 1583-91 PubMed GONUTS page
  5. Matsuyama, A et al. (2006) ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 24 841-7 PubMed GONUTS page
  6. Lustoza, AC et al. (2011) P(5A)-type ATPase Cta4p is essential for Ca2+ transport in the endoplasmic reticulum of Schizosaccharomyces pombe. PLoS ONE 6 e27843 PubMed GONUTS page
  7. 7.00 7.01 7.02 7.03 7.04 7.05 7.06 7.07 7.08 7.09 7.10 7.11 7.12 7.13 7.14 7.15 7.16 7.17 7.18 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page