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SCHPO:ATF1
Contents
Species (Taxon ID) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast). (284812) | |
Gene Name(s) | atf1 (synonyms: gad7, mts1, sss1) | |
Protein Name(s) | Transcription factor atf1
Protein sss1 Transcription factor mts1 | |
External Links | ||
UniProt | P52890 | |
EMBL | D63762 U38237 U87869 D63666 D83992 CU329671 | |
PIR | S66147 | |
RefSeq | NP_595652.1 | |
ProteinModelPortal | P52890 | |
SMR | P52890 | |
BioGrid | 276859 | |
IntAct | P52890 | |
STRING | 4896.SPBC29B5.01.1 | |
iPTMnet | P52890 | |
MaxQB | P52890 | |
PaxDb | P52890 | |
PRIDE | P52890 | |
EnsemblFungi | SPBC29B5.01.1 | |
EuPathDB | FungiDB:SPBC29B5.01 | |
PomBase | SPBC29B5.01 | |
InParanoid | P52890 | |
OMA | NATPFNW | |
PhylomeDB | P52890 | |
Reactome | R-SPO-3214847 R-SPO-450341 | |
PRO | PR:P52890 | |
Proteomes | UP000002485 | |
GO | GO:1990243 GO:0000790 GO:0005634 GO:0001228 GO:0003690 GO:0010844 GO:0003723 GO:0000978 GO:0010846 GO:0034605 GO:0071470 GO:0034599 GO:0006338 GO:0071852 GO:0110034 GO:0060195 GO:0045128 GO:0061417 GO:0016584 GO:1903694 GO:1904765 GO:0007131 GO:0051403 | |
InterPro | IPR004827 IPR021755 IPR020956 | |
Pfam | PF11786 PF11785 PF00170 | |
SMART | SM00338 | |
PROSITE | PS50217 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:1990243 |
atf1-pcr1 complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:1990243 |
atf1-pcr1 complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:1904765 |
positive regulation of transcription from RNA polymerase II promoter in response to maltose |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1903694 |
positive regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1903694 |
positive regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0110034 |
negative regulation of adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
part_of:(GO:1903694) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071852 |
fungal-type cell wall organization or biogenesis |
ECO:0000269 |
experimental evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071470 |
cellular response to osmotic stress |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071470 |
cellular response to osmotic stress |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071470 |
cellular response to osmotic stress |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0061417 |
negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_regulation_target:(PomBase:SPCC18B5.01c) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060195 |
negative regulation of antisense RNA transcription |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051403 |
stress-activated MAPK cascade |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
happens_during:(GO:0034605) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045128 |
negative regulation of reciprocal meiotic recombination |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034605 |
cellular response to heat |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034605 |
cellular response to heat |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034599 |
cellular response to oxidative stress |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034599 |
cellular response to oxidative stress |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016584 |
nucleosome positioning |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010846 |
activation of reciprocal meiotic recombination |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010846 |
activation of reciprocal meiotic recombination |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0010844 |
recombination hotspot binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
occurs_at:(SO:0001900) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007131 |
reciprocal meiotic recombination |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006338 |
chromatin remodeling |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0005720 |
nuclear heterochromatin |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
coincident_with:(SO:0001859) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005720 |
nuclear heterochromatin |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
coincident_with:(SO:0001843) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
exists_during:(GO:0072690) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
exists_during:(GO:0071470) |
Seeded From UniProt |
complete | ||
enables |
GO:0003723 |
RNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003690 |
double-stranded DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
occurs_at:(SO:0001900) |
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
has_regulation_target:(PomBase:SPBC32F12.03c) |
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
has_regulation_target:(PomBase:SPBC1198.14c) |
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
has_regulation_target:(PomBase:SPAPB24D3.10c) |
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
has_regulation_target:(PomBase:SPAC1705.03c) |
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
has_regulation_target:(PomBase:SPBC1347.11) |
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
has_regulation_target:(PomBase:SPBC365.12c) |
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_regulation_target:(PomBase:SPBC582.03) |
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
occurs_at:(SO:0001843) |
Seeded From UniProt |
complete | ||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
occurs_at:(SO:0001851) |
Seeded From UniProt |
complete | ||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
occurs_at:(SO:0001843) |
Seeded From UniProt |
complete | ||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_regulation_target:(PomBase:SPBC215.05) |
Seeded From UniProt |
complete | ||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
occurs_at:(SO:0001843) |
Seeded From UniProt |
complete | ||
part_of |
GO:0000790 |
nuclear chromatin |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0000790 |
nuclear chromatin |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
C |
coincident_with:(SO:0000167) |
Seeded From UniProt |
complete | ||
part_of |
GO:0000790 |
nuclear chromatin |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0000790 |
nuclear chromatin |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051321 |
meiotic cell cycle |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Kanoh, J et al. (1996) Schizosaccharomyces pombe gad7+ encodes a phosphoprotein with a bZIP domain, which is required for proper G1 arrest and gene expression under nitrogen starvation. Genes Cells 1 391-408 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Wahls, WP & Smith, GR (1994) A heteromeric protein that binds to a meiotic homologous recombination hot spot: correlation of binding and hot spot activity. Genes Dev. 8 1693-702 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 Kato, H et al. (2013) The transcription factors Atf1 and Pcr1 are essential for transcriptional induction of the extracellular maltase Agl1 in fission yeast. PLoS ONE 8 e80572 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 Davidson, MK et al. (2004) Atf1-Pcr1-M26 complex links stress-activated MAPK and cAMP-dependent protein kinase pathways via chromatin remodeling of cgs2+. J. Biol. Chem. 279 50857-63 PubMed GONUTS page
- ↑ Takada, H et al. (2007) Atf1 is a target of the mitogen-activated protein kinase Pmk1 and regulates cell integrity in fission yeast. Mol. Biol. Cell 18 4794-802 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 Shieh, JC et al. (1997) The Mcs4 response regulator coordinately controls the stress-activated Wak1-Wis1-Sty1 MAP kinase pathway and fission yeast cell cycle. Genes Dev. 11 1008-22 PubMed GONUTS page
- ↑ Shiozaki, K & Russell, P (1996) Conjugation, meiosis, and the osmotic stress response are regulated by Spc1 kinase through Atf1 transcription factor in fission yeast. Genes Dev. 10 2276-88 PubMed GONUTS page
- ↑ 8.0 8.1 8.2 Wilkinson, MG et al. (1996) The Atf1 transcription factor is a target for the Sty1 stress-activated MAP kinase pathway in fission yeast. Genes Dev. 10 2289-301 PubMed GONUTS page
- ↑ Toone, WM et al. (1998) Regulation of the fission yeast transcription factor Pap1 by oxidative stress: requirement for the nuclear export factor Crm1 (Exportin) and the stress-activated MAP kinase Sty1/Spc1. Genes Dev. 12 1453-63 PubMed GONUTS page
- ↑ 10.0 10.1 García, P et al. (2014) Binding of the transcription factor Atf1 to promoters serves as a barrier to phase nucleosome arrays and avoid cryptic transcription. Nucleic Acids Res. 42 10351-9 PubMed GONUTS page
- ↑ 11.0 11.1 Nguyen, AN & Shiozaki, K (1999) Heat-shock-induced activation of stress MAP kinase is regulated by threonine- and tyrosine-specific phosphatases. Genes Dev. 13 1653-63 PubMed GONUTS page
- ↑ Gao, J et al. (2008) Distinct regions of ATF/CREB proteins Atf1 and Pcr1 control recombination hotspot ade6-M26 and the osmotic stress response. Nucleic Acids Res. 36 2838-51 PubMed GONUTS page
- ↑ Nguyen, AN et al. (2000) Multistep phosphorelay proteins transmit oxidative stress signals to the fission yeast stress-activated protein kinase. Mol. Biol. Cell 11 1169-81 PubMed GONUTS page
- ↑ Kon, N et al. (1997) Transcription factor Mts1/Mts2 (Atf1/Pcr1, Gad7/Pcr1) activates the M26 meiotic recombination hotspot in Schizosaccharomyces pombe. Proc. Natl. Acad. Sci. U.S.A. 94 13765-70 PubMed GONUTS page
- ↑ 15.0 15.1 Gao, J et al. (2009) Phosphorylation-independent regulation of Atf1-promoted meiotic recombination by stress-activated, p38 kinase Spc1 of fission yeast. PLoS ONE 4 e5533 PubMed GONUTS page
- ↑ 16.0 16.1 Asada, R et al. (2017) Recruitment and delivery of the fission yeast Rst2 transcription factor via a local genome structure counteracts repression by Tup1-family corepressors. Nucleic Acids Res. 45 9361-9371 PubMed GONUTS page
- ↑ Matsuyama, A et al. (2006) ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 24 841-7 PubMed GONUTS page
- ↑ 18.0 18.1 Gaits, F et al. (1998) Phosphorylation and association with the transcription factor Atf1 regulate localization of Spc1/Sty1 stress-activated kinase in fission yeast. Genes Dev. 12 1464-73 PubMed GONUTS page
- ↑ Wahls, WP (1994) RNA associated with a heterodimeric protein that activates a meiotic homologous recombination hot spot: RL/RT/PCR strategy for cloning any unknown RNA or DNA. PCR Methods Appl. 3 272-7 PubMed GONUTS page
- ↑ Takada, H et al. (2010) The cell surface protein gene ecm33+ is a target of the two transcription factors Atf1 and Mbx1 and negatively regulates Pmk1 MAPK cell integrity signaling in fission yeast. Mol. Biol. Cell 21 674-85 PubMed GONUTS page
- ↑ Sundaram, G et al. (2008) Characterization of Sro1, a novel stress responsive protein in Schizosaccharomyces pombe. FEMS Yeast Res. 8 564-73 PubMed GONUTS page
- ↑ 22.0 22.1 Paredes, V et al. (2004) Transcriptional and post-translational regulation of neutral trehalase in Schizosaccharomyces pombe during thermal stress. Yeast 21 593-603 PubMed GONUTS page
- ↑ Taricani, L et al. (2002) The fission yeast ES2 homologue, Bis1, interacts with the Ish1 stress-responsive nuclear envelope protein. J. Biol. Chem. 277 10562-72 PubMed GONUTS page
- ↑ 24.0 24.1 Bandyopadhyay, S et al. (2014) The basic leucine zipper domain transcription factor Atf1 directly controls Cdc13 expression and regulates mitotic entry independently of Wee1 and Cdc25 in Schizosaccharomyces pombe. Eukaryotic Cell 13 813-21 PubMed GONUTS page
- ↑ 25.0 25.1 25.2 25.3 Shimasaki, T et al. (2014) Ecl1 is activated by the transcription factor Atf1 in response to H2O2 stress in Schizosaccharomyces pombe. Mol. Genet. Genomics 289 685-93 PubMed GONUTS page
- ↑ 26.0 26.1 Nakagawa, CW et al. (2000) Role of Atf1 and Pap1 in the induction of the catalase gene of fission yeast schizosaccharomyces pombe. J. Biochem. 127 233-8 PubMed GONUTS page
- ↑ Takeda, T et al. (1995) Schizosaccharomyces pombe atf1+ encodes a transcription factor required for sexual development and entry into stationary phase. EMBO J. 14 6193-208 PubMed GONUTS page
- ↑ Greenall, A et al. (2002) Role of fission yeast Tup1-like repressors and Prr1 transcription factor in response to salt stress. Mol. Biol. Cell 13 2977-89 PubMed GONUTS page
a
c
d
n
- GO:0060195 ! negative regulation of antisense RNA transcription
- GO:0045128 ! negative regulation of reciprocal meiotic recombination
- GO:0110034 ! negative regulation of adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway
- GO:0000790 ! nuclear chromatin
- GO:0005720 ! nuclear heterochromatin
- GO:0005634 ! nucleus
o
- GO:0061417 ! obsolete negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress
- GO:0016584 ! obsolete nucleosome positioning
- GO:1903694 ! obsolete positive regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation
- GO:1904765 ! obsolete positive regulation of transcription from RNA polymerase II promoter in response to maltose
r
s