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SCHPO:ATF1

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Species (Taxon ID) Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast). (284812)
Gene Name(s) atf1 (synonyms: gad7, mts1, sss1)
Protein Name(s) Transcription factor atf1

Protein sss1 Transcription factor mts1

External Links
UniProt P52890
EMBL D63762
U38237
U87869
D63666
D83992
CU329671
PIR S66147
RefSeq NP_595652.1
ProteinModelPortal P52890
SMR P52890
BioGrid 276859
IntAct P52890
STRING 4896.SPBC29B5.01.1
iPTMnet P52890
MaxQB P52890
PaxDb P52890
PRIDE P52890
EnsemblFungi SPBC29B5.01.1
EuPathDB FungiDB:SPBC29B5.01
PomBase SPBC29B5.01
InParanoid P52890
OMA NATPFNW
PhylomeDB P52890
Reactome R-SPO-3214847
R-SPO-450341
PRO PR:P52890
Proteomes UP000002485
GO GO:1990243
GO:0000790
GO:0005634
GO:0001228
GO:0003690
GO:0010844
GO:0003723
GO:0000978
GO:0010846
GO:0034605
GO:0071470
GO:0034599
GO:0006338
GO:0071852
GO:0110034
GO:0060195
GO:0045128
GO:0061417
GO:0016584
GO:1903694
GO:1904765
GO:0007131
GO:0051403
InterPro IPR004827
IPR021755
IPR020956
Pfam PF11786
PF11785
PF00170
SMART SM00338
PROSITE PS50217

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:1990243

atf1-pcr1 complex

PMID:9135083[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:1990243

atf1-pcr1 complex

PMID:7958849[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:1904765

positive regulation of transcription from RNA polymerase II promoter in response to maltose

PMID:24224056[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1903694

positive regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation

PMID:9135083[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1903694

positive regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation

PMID:15448137[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0110034

negative regulation of adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway

PMID:15448137[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

part_of:(GO:1903694)

Seeded From UniProt

complete

involved_in

GO:0071852

fungal-type cell wall organization or biogenesis

PMID:17881729[5]

ECO:0000269

experimental evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071470

cellular response to osmotic stress

PMID:9136929[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071470

cellular response to osmotic stress

PMID:8824587[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071470

cellular response to osmotic stress

PMID:8824588[8]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0061417

negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress

PMID:9585505[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

has_regulation_target:(PomBase:SPCC18B5.01c)

Seeded From UniProt

complete

involved_in

GO:0060195

negative regulation of antisense RNA transcription

PMID:25122751[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051403

stress-activated MAPK cascade

PMID:10398679[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

happens_during:(GO:0034605)

Seeded From UniProt

complete

involved_in

GO:0045128

negative regulation of reciprocal meiotic recombination

PMID:18375981[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0034605

cellular response to heat

PMID:9136929[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0034605

cellular response to heat

PMID:10398679[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0034599

cellular response to oxidative stress

PMID:9136929[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0034599

cellular response to oxidative stress

PMID:10749922[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0016584

nucleosome positioning

PMID:25122751[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010846

activation of reciprocal meiotic recombination

PMID:9391101[14]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010846

activation of reciprocal meiotic recombination

PMID:19436749[15]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0010844

recombination hotspot binding

PMID:7958849[2]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0001900)

Seeded From UniProt

complete

involved_in

GO:0007131

reciprocal meiotic recombination

PMID:7958849[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006338

chromatin remodeling

PMID:15448137[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • happens_during:(GO:0006995)
  • occurs_at:(SO:0001843)

Seeded From UniProt

complete

part_of

GO:0005720

nuclear heterochromatin

PMID:28934464[16]

ECO:0000314

direct assay evidence used in manual assertion

C

coincident_with:(SO:0001859)

Seeded From UniProt

complete

part_of

GO:0005720

nuclear heterochromatin

PMID:28934464[16]

ECO:0000314

direct assay evidence used in manual assertion

C

coincident_with:(SO:0001843)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:16823372[17]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:9585506[18]

ECO:0000314

direct assay evidence used in manual assertion

C

exists_during:(GO:0072690)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:9585506[18]

ECO:0000314

direct assay evidence used in manual assertion

C

exists_during:(GO:0071470)

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:7518718[19]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003690

double-stranded DNA binding

PMID:7958849[2]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0001900)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:24224056[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

has_regulation_target:(PomBase:SPBC32F12.03c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:24224056[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

has_regulation_target:(PomBase:SPBC1198.14c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:24224056[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

has_regulation_target:(PomBase:SPAPB24D3.10c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:20032302[20]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

has_regulation_target:(PomBase:SPAC1705.03c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:18410345[21]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

has_regulation_target:(PomBase:SPBC1347.11)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:15164362[22]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

  • happens_during:(GO:0071276)
  • has_regulation_target:(PomBase:SPBC660.07)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:15164362[22]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

  • happens_during:(GO:0034605)
  • has_regulation_target:(PomBase:SPBC660.07)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:11751918[23]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

has_regulation_target:(PomBase:SPBC365.12c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:24728197[24]

ECO:0000314

direct assay evidence used in manual assertion

F

has_regulation_target:(PomBase:SPBC582.03)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:24696293[25]

ECO:0000314

direct assay evidence used in manual assertion

F

  • happens_during:(GO:0072690)
  • has_regulation_target:(PomBase:SPCC757.07c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:24696293[25]

ECO:0000314

direct assay evidence used in manual assertion

F

  • happens_during:(GO:0072690)
  • has_regulation_target:(PomBase:SPCC70.12c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:15448137[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:10731689[26]

ECO:0000314

direct assay evidence used in manual assertion

F

  • happens_during:(GO:0071470)
  • has_regulation_target:(PomBase:SPCC757.07c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:10731689[26]

ECO:0000314

direct assay evidence used in manual assertion

F

  • happens_during:(GO:0034605)
  • has_regulation_target:(PomBase:SPCC757.07c)

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:8557039[27]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

occurs_at:(SO:0001843)

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:9135083[1]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0001851)

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:9135083[1]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0001843)

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:8824588[8]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:8824588[8]

ECO:0000314

direct assay evidence used in manual assertion

F

has_regulation_target:(PomBase:SPBC215.05)

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:24696293[25]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:15448137[4]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0001843)

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:19436749[15]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:12221110[28]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

coincident_with:(SO:0000167)

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:24728197[24]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:24696293[25]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004827

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004827

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0051321

meiotic cell cycle

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0469

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ 1.0 1.1 1.2 1.3 Kanoh, J et al. (1996) Schizosaccharomyces pombe gad7+ encodes a phosphoprotein with a bZIP domain, which is required for proper G1 arrest and gene expression under nitrogen starvation. Genes Cells 1 391-408 PubMed GONUTS page
  2. ↑ 2.0 2.1 2.2 2.3 Wahls, WP & Smith, GR (1994) A heteromeric protein that binds to a meiotic homologous recombination hot spot: correlation of binding and hot spot activity. Genes Dev. 8 1693-702 PubMed GONUTS page
  3. ↑ 3.0 3.1 3.2 3.3 Kato, H et al. (2013) The transcription factors Atf1 and Pcr1 are essential for transcriptional induction of the extracellular maltase Agl1 in fission yeast. PLoS ONE 8 e80572 PubMed GONUTS page
  4. ↑ 4.0 4.1 4.2 4.3 4.4 Davidson, MK et al. (2004) Atf1-Pcr1-M26 complex links stress-activated MAPK and cAMP-dependent protein kinase pathways via chromatin remodeling of cgs2+. J. Biol. Chem. 279 50857-63 PubMed GONUTS page
  5. ↑ Takada, H et al. (2007) Atf1 is a target of the mitogen-activated protein kinase Pmk1 and regulates cell integrity in fission yeast. Mol. Biol. Cell 18 4794-802 PubMed GONUTS page
  6. ↑ 6.0 6.1 6.2 Shieh, JC et al. (1997) The Mcs4 response regulator coordinately controls the stress-activated Wak1-Wis1-Sty1 MAP kinase pathway and fission yeast cell cycle. Genes Dev. 11 1008-22 PubMed GONUTS page
  7. ↑ Shiozaki, K & Russell, P (1996) Conjugation, meiosis, and the osmotic stress response are regulated by Spc1 kinase through Atf1 transcription factor in fission yeast. Genes Dev. 10 2276-88 PubMed GONUTS page
  8. ↑ 8.0 8.1 8.2 Wilkinson, MG et al. (1996) The Atf1 transcription factor is a target for the Sty1 stress-activated MAP kinase pathway in fission yeast. Genes Dev. 10 2289-301 PubMed GONUTS page
  9. ↑ Toone, WM et al. (1998) Regulation of the fission yeast transcription factor Pap1 by oxidative stress: requirement for the nuclear export factor Crm1 (Exportin) and the stress-activated MAP kinase Sty1/Spc1. Genes Dev. 12 1453-63 PubMed GONUTS page
  10. ↑ 10.0 10.1 García, P et al. (2014) Binding of the transcription factor Atf1 to promoters serves as a barrier to phase nucleosome arrays and avoid cryptic transcription. Nucleic Acids Res. 42 10351-9 PubMed GONUTS page
  11. ↑ 11.0 11.1 Nguyen, AN & Shiozaki, K (1999) Heat-shock-induced activation of stress MAP kinase is regulated by threonine- and tyrosine-specific phosphatases. Genes Dev. 13 1653-63 PubMed GONUTS page
  12. ↑ Gao, J et al. (2008) Distinct regions of ATF/CREB proteins Atf1 and Pcr1 control recombination hotspot ade6-M26 and the osmotic stress response. Nucleic Acids Res. 36 2838-51 PubMed GONUTS page
  13. ↑ Nguyen, AN et al. (2000) Multistep phosphorelay proteins transmit oxidative stress signals to the fission yeast stress-activated protein kinase. Mol. Biol. Cell 11 1169-81 PubMed GONUTS page
  14. ↑ Kon, N et al. (1997) Transcription factor Mts1/Mts2 (Atf1/Pcr1, Gad7/Pcr1) activates the M26 meiotic recombination hotspot in Schizosaccharomyces pombe. Proc. Natl. Acad. Sci. U.S.A. 94 13765-70 PubMed GONUTS page
  15. ↑ 15.0 15.1 Gao, J et al. (2009) Phosphorylation-independent regulation of Atf1-promoted meiotic recombination by stress-activated, p38 kinase Spc1 of fission yeast. PLoS ONE 4 e5533 PubMed GONUTS page
  16. ↑ 16.0 16.1 Asada, R et al. (2017) Recruitment and delivery of the fission yeast Rst2 transcription factor via a local genome structure counteracts repression by Tup1-family corepressors. Nucleic Acids Res. 45 9361-9371 PubMed GONUTS page
  17. ↑ Matsuyama, A et al. (2006) ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 24 841-7 PubMed GONUTS page
  18. ↑ 18.0 18.1 Gaits, F et al. (1998) Phosphorylation and association with the transcription factor Atf1 regulate localization of Spc1/Sty1 stress-activated kinase in fission yeast. Genes Dev. 12 1464-73 PubMed GONUTS page
  19. ↑ Wahls, WP (1994) RNA associated with a heterodimeric protein that activates a meiotic homologous recombination hot spot: RL/RT/PCR strategy for cloning any unknown RNA or DNA. PCR Methods Appl. 3 272-7 PubMed GONUTS page
  20. ↑ Takada, H et al. (2010) The cell surface protein gene ecm33+ is a target of the two transcription factors Atf1 and Mbx1 and negatively regulates Pmk1 MAPK cell integrity signaling in fission yeast. Mol. Biol. Cell 21 674-85 PubMed GONUTS page
  21. ↑ Sundaram, G et al. (2008) Characterization of Sro1, a novel stress responsive protein in Schizosaccharomyces pombe. FEMS Yeast Res. 8 564-73 PubMed GONUTS page
  22. ↑ 22.0 22.1 Paredes, V et al. (2004) Transcriptional and post-translational regulation of neutral trehalase in Schizosaccharomyces pombe during thermal stress. Yeast 21 593-603 PubMed GONUTS page
  23. ↑ Taricani, L et al. (2002) The fission yeast ES2 homologue, Bis1, interacts with the Ish1 stress-responsive nuclear envelope protein. J. Biol. Chem. 277 10562-72 PubMed GONUTS page
  24. ↑ 24.0 24.1 Bandyopadhyay, S et al. (2014) The basic leucine zipper domain transcription factor Atf1 directly controls Cdc13 expression and regulates mitotic entry independently of Wee1 and Cdc25 in Schizosaccharomyces pombe. Eukaryotic Cell 13 813-21 PubMed GONUTS page
  25. ↑ 25.0 25.1 25.2 25.3 Shimasaki, T et al. (2014) Ecl1 is activated by the transcription factor Atf1 in response to H2O2 stress in Schizosaccharomyces pombe. Mol. Genet. Genomics 289 685-93 PubMed GONUTS page
  26. ↑ 26.0 26.1 Nakagawa, CW et al. (2000) Role of Atf1 and Pap1 in the induction of the catalase gene of fission yeast schizosaccharomyces pombe. J. Biochem. 127 233-8 PubMed GONUTS page
  27. ↑ Takeda, T et al. (1995) Schizosaccharomyces pombe atf1+ encodes a transcription factor required for sexual development and entry into stationary phase. EMBO J. 14 6193-208 PubMed GONUTS page
  28. ↑ Greenall, A et al. (2002) Role of fission yeast Tup1-like repressors and Prr1 transcription factor in response to salt stress. Mol. Biol. Cell 13 2977-89 PubMed GONUTS page