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SCHPO:ATF1

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Species (Taxon ID) Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast). (284812)
Gene Name(s) atf1 (synonyms: gad7, mts1, sss1)
Protein Name(s) Transcription factor atf1

Protein sss1 Transcription factor mts1

External Links
UniProt P52890
EMBL D63762
U38237
U87869
D63666
D83992
CU329671
PIR S66147
RefSeq NP_595652.1
ProteinModelPortal P52890
SMR P52890
BioGrid 276859
IntAct P52890
STRING 4896.SPBC29B5.01.1
iPTMnet P52890
MaxQB P52890
PaxDb P52890
PRIDE P52890
EnsemblFungi SPBC29B5.01.1
EuPathDB FungiDB:SPBC29B5.01
PomBase SPBC29B5.01
InParanoid P52890
OMA NATPFNW
PhylomeDB P52890
Reactome R-SPO-3214847
R-SPO-450341
PRO PR:P52890
Proteomes UP000002485
GO GO:1990243
GO:0000790
GO:0005634
GO:0001228
GO:0003690
GO:0010844
GO:0003723
GO:0000978
GO:0010846
GO:0034605
GO:0071470
GO:0034599
GO:0006338
GO:0071852
GO:0110034
GO:0060195
GO:0045128
GO:0061417
GO:0016584
GO:1903694
GO:1904765
GO:0007131
GO:0051403
InterPro IPR004827
IPR021755
IPR020956
Pfam PF11786
PF11785
PF00170
SMART SM00338
PROSITE PS50217

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:1990243

atf1-pcr1 complex

PMID:9135083[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:1990243

atf1-pcr1 complex

PMID:7958849[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:1904765

positive regulation of transcription from RNA polymerase II promoter in response to maltose

PMID:24224056[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1903694

positive regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation

PMID:9135083[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1903694

positive regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation

PMID:15448137[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0110034

negative regulation of adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway

PMID:15448137[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

part_of:(GO:1903694)

Seeded From UniProt

complete

involved_in

GO:0071852

fungal-type cell wall organization or biogenesis

PMID:17881729[5]

ECO:0000269

experimental evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071470

cellular response to osmotic stress

PMID:9136929[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071470

cellular response to osmotic stress

PMID:8824587[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071470

cellular response to osmotic stress

PMID:8824588[8]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0061417

negative regulation of transcription from RNA polymerase II promoter in response to oxidative stress

PMID:9585505[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

has_regulation_target:(PomBase:SPCC18B5.01c)

Seeded From UniProt

complete

involved_in

GO:0060195

negative regulation of antisense RNA transcription

PMID:25122751[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051403

stress-activated MAPK cascade

PMID:10398679[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

happens_during:(GO:0034605)

Seeded From UniProt

complete

involved_in

GO:0045128

negative regulation of reciprocal meiotic recombination

PMID:18375981[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0034605

cellular response to heat

PMID:9136929[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0034605

cellular response to heat

PMID:10398679[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0034599

cellular response to oxidative stress

PMID:9136929[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0034599

cellular response to oxidative stress

PMID:10749922[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0016584

nucleosome positioning

PMID:25122751[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010846

activation of reciprocal meiotic recombination

PMID:9391101[14]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010846

activation of reciprocal meiotic recombination

PMID:19436749[15]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0010844

recombination hotspot binding

PMID:7958849[2]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0001900)

Seeded From UniProt

complete

involved_in

GO:0007131

reciprocal meiotic recombination

PMID:7958849[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006338

chromatin remodeling

PMID:15448137[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • happens_during:(GO:0006995)
  • occurs_at:(SO:0001843)

Seeded From UniProt

complete

part_of

GO:0005720

nuclear heterochromatin

PMID:28934464[16]

ECO:0000314

direct assay evidence used in manual assertion

C

coincident_with:(SO:0001859)

Seeded From UniProt

complete

part_of

GO:0005720

nuclear heterochromatin

PMID:28934464[16]

ECO:0000314

direct assay evidence used in manual assertion

C

coincident_with:(SO:0001843)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:16823372[17]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:9585506[18]

ECO:0000314

direct assay evidence used in manual assertion

C

exists_during:(GO:0072690)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:9585506[18]

ECO:0000314

direct assay evidence used in manual assertion

C

exists_during:(GO:0071470)

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:7518718[19]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003690

double-stranded DNA binding

PMID:7958849[2]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0001900)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:24224056[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

has_regulation_target:(PomBase:SPBC32F12.03c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:24224056[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

has_regulation_target:(PomBase:SPBC1198.14c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:24224056[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

has_regulation_target:(PomBase:SPAPB24D3.10c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:20032302[20]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

has_regulation_target:(PomBase:SPAC1705.03c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:18410345[21]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

has_regulation_target:(PomBase:SPBC1347.11)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:15164362[22]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

  • happens_during:(GO:0071276)
  • has_regulation_target:(PomBase:SPBC660.07)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:15164362[22]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

  • happens_during:(GO:0034605)
  • has_regulation_target:(PomBase:SPBC660.07)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:11751918[23]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

has_regulation_target:(PomBase:SPBC365.12c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:24728197[24]

ECO:0000314

direct assay evidence used in manual assertion

F

has_regulation_target:(PomBase:SPBC582.03)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:24696293[25]

ECO:0000314

direct assay evidence used in manual assertion

F

  • happens_during:(GO:0072690)
  • has_regulation_target:(PomBase:SPCC757.07c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:24696293[25]

ECO:0000314

direct assay evidence used in manual assertion

F

  • happens_during:(GO:0072690)
  • has_regulation_target:(PomBase:SPCC70.12c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:15448137[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:10731689[26]

ECO:0000314

direct assay evidence used in manual assertion

F

  • happens_during:(GO:0071470)
  • has_regulation_target:(PomBase:SPCC757.07c)

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:10731689[26]

ECO:0000314

direct assay evidence used in manual assertion

F

  • happens_during:(GO:0034605)
  • has_regulation_target:(PomBase:SPCC757.07c)

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:8557039[27]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

occurs_at:(SO:0001843)

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:9135083[1]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0001851)

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:9135083[1]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0001843)

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:8824588[8]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:8824588[8]

ECO:0000314

direct assay evidence used in manual assertion

F

has_regulation_target:(PomBase:SPBC215.05)

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:24696293[25]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:15448137[4]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0001843)

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:19436749[15]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:12221110[28]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

coincident_with:(SO:0000167)

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:24728197[24]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:24696293[25]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004827

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004827

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0051321

meiotic cell cycle

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0469

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Kanoh, J et al. (1996) Schizosaccharomyces pombe gad7+ encodes a phosphoprotein with a bZIP domain, which is required for proper G1 arrest and gene expression under nitrogen starvation. Genes Cells 1 391-408 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 Wahls, WP & Smith, GR (1994) A heteromeric protein that binds to a meiotic homologous recombination hot spot: correlation of binding and hot spot activity. Genes Dev. 8 1693-702 PubMed GONUTS page
  3. 3.0 3.1 3.2 3.3 Kato, H et al. (2013) The transcription factors Atf1 and Pcr1 are essential for transcriptional induction of the extracellular maltase Agl1 in fission yeast. PLoS ONE 8 e80572 PubMed GONUTS page
  4. 4.0 4.1 4.2 4.3 4.4 Davidson, MK et al. (2004) Atf1-Pcr1-M26 complex links stress-activated MAPK and cAMP-dependent protein kinase pathways via chromatin remodeling of cgs2+. J. Biol. Chem. 279 50857-63 PubMed GONUTS page
  5. Takada, H et al. (2007) Atf1 is a target of the mitogen-activated protein kinase Pmk1 and regulates cell integrity in fission yeast. Mol. Biol. Cell 18 4794-802 PubMed GONUTS page
  6. 6.0 6.1 6.2 Shieh, JC et al. (1997) The Mcs4 response regulator coordinately controls the stress-activated Wak1-Wis1-Sty1 MAP kinase pathway and fission yeast cell cycle. Genes Dev. 11 1008-22 PubMed GONUTS page
  7. Shiozaki, K & Russell, P (1996) Conjugation, meiosis, and the osmotic stress response are regulated by Spc1 kinase through Atf1 transcription factor in fission yeast. Genes Dev. 10 2276-88 PubMed GONUTS page
  8. 8.0 8.1 8.2 Wilkinson, MG et al. (1996) The Atf1 transcription factor is a target for the Sty1 stress-activated MAP kinase pathway in fission yeast. Genes Dev. 10 2289-301 PubMed GONUTS page
  9. Toone, WM et al. (1998) Regulation of the fission yeast transcription factor Pap1 by oxidative stress: requirement for the nuclear export factor Crm1 (Exportin) and the stress-activated MAP kinase Sty1/Spc1. Genes Dev. 12 1453-63 PubMed GONUTS page
  10. 10.0 10.1 García, P et al. (2014) Binding of the transcription factor Atf1 to promoters serves as a barrier to phase nucleosome arrays and avoid cryptic transcription. Nucleic Acids Res. 42 10351-9 PubMed GONUTS page
  11. 11.0 11.1 Nguyen, AN & Shiozaki, K (1999) Heat-shock-induced activation of stress MAP kinase is regulated by threonine- and tyrosine-specific phosphatases. Genes Dev. 13 1653-63 PubMed GONUTS page
  12. Gao, J et al. (2008) Distinct regions of ATF/CREB proteins Atf1 and Pcr1 control recombination hotspot ade6-M26 and the osmotic stress response. Nucleic Acids Res. 36 2838-51 PubMed GONUTS page
  13. Nguyen, AN et al. (2000) Multistep phosphorelay proteins transmit oxidative stress signals to the fission yeast stress-activated protein kinase. Mol. Biol. Cell 11 1169-81 PubMed GONUTS page
  14. Kon, N et al. (1997) Transcription factor Mts1/Mts2 (Atf1/Pcr1, Gad7/Pcr1) activates the M26 meiotic recombination hotspot in Schizosaccharomyces pombe. Proc. Natl. Acad. Sci. U.S.A. 94 13765-70 PubMed GONUTS page
  15. 15.0 15.1 Gao, J et al. (2009) Phosphorylation-independent regulation of Atf1-promoted meiotic recombination by stress-activated, p38 kinase Spc1 of fission yeast. PLoS ONE 4 e5533 PubMed GONUTS page
  16. 16.0 16.1 Asada, R et al. (2017) Recruitment and delivery of the fission yeast Rst2 transcription factor via a local genome structure counteracts repression by Tup1-family corepressors. Nucleic Acids Res. 45 9361-9371 PubMed GONUTS page
  17. Matsuyama, A et al. (2006) ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 24 841-7 PubMed GONUTS page
  18. 18.0 18.1 Gaits, F et al. (1998) Phosphorylation and association with the transcription factor Atf1 regulate localization of Spc1/Sty1 stress-activated kinase in fission yeast. Genes Dev. 12 1464-73 PubMed GONUTS page
  19. Wahls, WP (1994) RNA associated with a heterodimeric protein that activates a meiotic homologous recombination hot spot: RL/RT/PCR strategy for cloning any unknown RNA or DNA. PCR Methods Appl. 3 272-7 PubMed GONUTS page
  20. Takada, H et al. (2010) The cell surface protein gene ecm33+ is a target of the two transcription factors Atf1 and Mbx1 and negatively regulates Pmk1 MAPK cell integrity signaling in fission yeast. Mol. Biol. Cell 21 674-85 PubMed GONUTS page
  21. Sundaram, G et al. (2008) Characterization of Sro1, a novel stress responsive protein in Schizosaccharomyces pombe. FEMS Yeast Res. 8 564-73 PubMed GONUTS page
  22. 22.0 22.1 Paredes, V et al. (2004) Transcriptional and post-translational regulation of neutral trehalase in Schizosaccharomyces pombe during thermal stress. Yeast 21 593-603 PubMed GONUTS page
  23. Taricani, L et al. (2002) The fission yeast ES2 homologue, Bis1, interacts with the Ish1 stress-responsive nuclear envelope protein. J. Biol. Chem. 277 10562-72 PubMed GONUTS page
  24. 24.0 24.1 Bandyopadhyay, S et al. (2014) The basic leucine zipper domain transcription factor Atf1 directly controls Cdc13 expression and regulates mitotic entry independently of Wee1 and Cdc25 in Schizosaccharomyces pombe. Eukaryotic Cell 13 813-21 PubMed GONUTS page
  25. 25.0 25.1 25.2 25.3 Shimasaki, T et al. (2014) Ecl1 is activated by the transcription factor Atf1 in response to H2O2 stress in Schizosaccharomyces pombe. Mol. Genet. Genomics 289 685-93 PubMed GONUTS page
  26. 26.0 26.1 Nakagawa, CW et al. (2000) Role of Atf1 and Pap1 in the induction of the catalase gene of fission yeast schizosaccharomyces pombe. J. Biochem. 127 233-8 PubMed GONUTS page
  27. Takeda, T et al. (1995) Schizosaccharomyces pombe atf1+ encodes a transcription factor required for sexual development and entry into stationary phase. EMBO J. 14 6193-208 PubMed GONUTS page
  28. Greenall, A et al. (2002) Role of fission yeast Tup1-like repressors and Prr1 transcription factor in response to salt stress. Mol. Biol. Cell 13 2977-89 PubMed GONUTS page