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SALTY:CYAY

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Species (Taxon ID) Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287)
Gene Name(s) cyaY
Protein Name(s) Protein CyaY
External Links
UniProt P56978
EMBL AF233324
AE006468
RefSeq NP_462829.1
WP_000999930.1
ProteinModelPortal P56978
SMR P56978
STRING 99287.STM3943
PRIDE P56978
EnsemblBacteria AAL22788
GeneID 1255469
KEGG stm:STM3943
PATRIC 32386749
HOGENOM HOG000190728
KO K06202
OMA LHQIWVA
OrthoDB EOG6GXTXM
PhylomeDB P56978
BioCyc SENT99287:GCTI-3972-MONOMER
Proteomes UP000001014
GO GO:0008199
GO:0016226
Gene3D 3.30.920.10
HAMAP MF_00142
InterPro IPR002908
IPR020895
PANTHER PTHR16821
Pfam PF01491
SUPFAM SSF55387
TIGRFAMs TIGR03421
PROSITE PS01344
PS50810

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

incorrect (CACAO)

GO:0000302

response to reactive oxygen species

PMID:16428423[1]

ECO:0000315

P

A cyaY::kan mutant has increased sensitivity to paraquat (Table 2). No, the sensitivity is only seen in a double mutant lacking both cyaY and yggX.

complete

GO:0016226

iron-sulfur cluster assembly

PMID:16428423[1]

ECO:0000316

UniProtKB:P67617


P

A cyaY yggX double mutant has reduced activity of the Fe-S cluster enzyme SDH (Table 1).

complete

GO:0000302

response to reactive oxygen species

PMID:16428423[1]

ECO:0000316

UniProtKB:P67617


P

A cyaY and yggX double mutant has increased sensitivity to paraquat (Table 2).

complete

enables

GO:0008199

ferric iron binding

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG11653
PANTHER:PTN001047910

F

Seeded From UniProt

complete

enables

GO:0008198

ferrous iron binding

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG11653
PANTHER:PTN001047910

F

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG11653
PANTHER:PTN001047910

C

Seeded From UniProt

complete

enables

GO:0008199

ferric iron binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002908
InterPro:IPR036524

F

Seeded From UniProt

complete

involved_in

GO:0016226

iron-sulfur cluster assembly

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002908
InterPro:IPR036524

P

Seeded From UniProt

complete

involved_in

GO:0016226

iron-sulfur cluster assembly

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000033437

P

Seeded From UniProt

complete

enables

GO:0005506

iron ion binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000033437

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Vivas, E et al. (2006) Salmonella enterica strains lacking the frataxin homolog CyaY show defects in Fe-S cluster metabolism in vivo. J. Bacteriol. 188 1175-9 PubMed GONUTS page
  2. 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page