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RAT:SDC3
Contents
| Species (Taxon ID) | Rattus norvegicus (Rat). (10116) | |
| Gene Name(s) | Sdc3 (synonyms: Synd3) | |
| Protein Name(s) | Syndecan-3
SYND3 N-syndecan Neuroglycan | |
| External Links | ||
| UniProt | P33671 | |
| EMBL | U52825 U73184 X63143 | |
| PIR | A41558 | |
| RefSeq | NP_446345.3 | |
| UniGene | Rn.10504 | |
| ProteinModelPortal | P33671 | |
| IntAct | P33671 | |
| STRING | 10116.ENSRNOP00000041634 | |
| PhosphoSite | P33671 | |
| PaxDb | P33671 | |
| GeneID | 116673 | |
| KEGG | rno:116673 | |
| UCSC | RGD:621486 | |
| CTD | 9672 | |
| RGD | 621486 | |
| eggNOG | NOG85596 | |
| HOGENOM | HOG000049151 | |
| HOVERGEN | HBG004144 | |
| InParanoid | P33671 | |
| KO | K16337 | |
| PhylomeDB | P33671 | |
| NextBio | 619495 | |
| PRO | PR:P33671 | |
| Proteomes | UP000002494 | |
| Genevestigator | P33671 | |
| GO | GO:0030424 GO:0016021 GO:0016020 GO:0043005 GO:0043234 GO:0007155 | |
| InterPro | IPR003585 IPR001050 IPR027789 | |
| PANTHER | PTHR10915 | |
| Pfam | PF01034 | |
| SMART | SM00294 | |
| PROSITE | PS00964 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0030334 |
regulation of cell migration |
ECO:0000314 |
P |
Figures 4 & 5 |
complete | |||||
|
involved_in |
GO:0030334 |
regulation of cell migration |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0014775) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0043005 |
neuron projection |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0032991 |
protein-containing complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0030424 |
axon |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007155 |
cell adhesion |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016477 |
cell migration |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000099415 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0009986 |
cell surface |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1349162 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0016020 |
membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 De Rossi, G & Whiteford, JR (2013) A novel role for syndecan-3 in angiogenesis. F1000Res 2 270 PubMed GONUTS page
- ↑ Kantor, DB et al. (2004) Semaphorin 5A is a bifunctional axon guidance cue regulated by heparan and chondroitin sulfate proteoglycans. Neuron 44 961-75 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Hsueh, YP et al. (2001) Bipartite interaction between neurofibromatosis type I protein (neurofibromin) and syndecan transmembrane heparan sulfate proteoglycans. J. Neurosci. 21 3764-70 PubMed GONUTS page
- ↑ 4.0 4.1 Erdman, R et al. (2002) Schwann cell adhesion to a novel heparan sulfate binding site in the N-terminal domain of alpha 4 type V collagen is mediated by syndecan-3. J. Biol. Chem. 277 7619-25 PubMed GONUTS page
- ↑ 5.0 5.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
