GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

RAT:KPYM

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Rattus norvegicus (Rat). (10116)
Gene Name(s) Pkm (synonyms: Pkm2, Pykm)
Protein Name(s) Pyruvate kinase PKM

Pyruvate kinase muscle isozyme

External Links
UniProt P11980
EMBL M24359
M24359
M14377
X15800
PIR A26186
B26186
RefSeq NP_445749.1
UniGene Rn.1556
ProteinModelPortal P11980
SMR P11980
BioGrid 247659
IntAct P11980
BindingDB P11980
ChEMBL CHEMBL4994
MoonProt P11980
PhosphoSite P11980
World-2DPAGE 0004:P11980
PaxDb P11980
PRIDE P11980
Ensembl ENSRNOT00000015332
GeneID 25630
KEGG rno:25630
UCSC RGD:3337
CTD 5315
RGD 3337
eggNOG COG0469
GeneTree ENSGT00390000008859
HOGENOM HOG000021559
HOVERGEN HBG000941
InParanoid P11980
KO K00873
OMA IELCRRN
OrthoDB EOG78M01Q
PhylomeDB P11980
TreeFam TF300390
Reactome REACT_225694
SABIO-RK P11980
UniPathway UPA00109
NextBio 607431
Proteomes UP000002494
Genevestigator P11980
GO GO:0005737
GO:0005634
GO:0043531
GO:0005524
GO:0000287
GO:0030955
GO:0004743
GO:0006754
GO:0006006
GO:0006096
GO:0001889
GO:0031100
GO:0042866
GO:0009629
GO:0001666
GO:0032868
GO:0014870
GO:0007584
GO:0010033
GO:0043403
Gene3D 2.40.33.10
3.20.20.60
3.40.1380.20
InterPro IPR001697
IPR015813
IPR011037
IPR015794
IPR018209
IPR015793
IPR015795
IPR015806
PANTHER PTHR11817
Pfam PF00224
PF02887
PRINTS PR01050
SUPFAM SSF50800
SSF51621
SSF52935
TIGRFAMs TIGR01064
PROSITE PS00110

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:1903672

positive regulation of sprouting angiogenesis

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P14618

P

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

PMID:1883388[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0051289

protein homotetramerization

PMID:1883388[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:1902912

pyruvate kinase complex

PMID:1883388[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0006096

glycolytic process

PMID:1883388[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0004743

pyruvate kinase activity

PMID:1883388[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0070324

thyroid hormone binding

PMID:1883388[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0043531

ADP binding

PMID:7040662[2]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0043403

skeletal muscle tissue regeneration

PMID:145474[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0042866

pyruvate biosynthetic process

PMID:4273555[4]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0032868

response to insulin

PMID:7929251[5]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0031100

animal organ regeneration

PMID:4005043[6]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0014870

response to muscle inactivity

PMID:6331066[7]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010033

response to organic substance

PMID:6537126[8]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0009629

response to gravity

PMID:12165359[9]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0007584

response to nutrient

PMID:7929251[5]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006754

ATP biosynthetic process

PMID:4273555[4]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006096

glycolytic process

PMID:8255543[10]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006096

glycolytic process

PMID:4273555[4]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006006

glucose metabolic process

PMID:7929251[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0004743

pyruvate kinase activity

PMID:8255543[10]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0004743

pyruvate kinase activity

PMID:4273555[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0001889

liver development

PMID:7327170[11]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0001666

response to hypoxia

PMID:3696161[12]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0032869

cellular response to insulin stimulus

PMID:21873635[13]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000212861
RGD:3336

P

Seeded From UniProt

complete

involved_in

GO:0006096

glycolytic process

PMID:21873635[13]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10803
EcoGene:EG10804
MGI:MGI:97591
PANTHER:PTN000212670
RGD:3336
RGD:3337
SGD:S000000036
UniProtKB:Q2RAK2

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[13]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000212670
SGD:S000000036
UniProtKB:P14618

C

Seeded From UniProt

complete

enables

GO:0004743

pyruvate kinase activity

PMID:21873635[13]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10803
EcoGene:EG10804
MGI:MGI:97591
MGI:MGI:97604
PANTHER:PTN000212670
PomBase:SPAC4H3.10c
RGD:3336
RGD:3337
SGD:S000000036
SGD:S000005874
TAIR:locus:2033760
TAIR:locus:2084583
TAIR:locus:2176912
UniProtKB:C6KTA4
UniProtKB:P14618
UniProtKB:P30613
UniProtKB:Q2RAK2

F

Seeded From UniProt

complete

involved_in

GO:1903672

positive regulation of sprouting angiogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14618
ensembl:ENSP00000320171

P

Seeded From UniProt

complete

involved_in

GO:0012501

programmed cell death

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14618
ensembl:ENSP00000320171

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14618
ensembl:ENSP00000320171

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14618
ensembl:ENSP00000320171

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14618
ensembl:ENSP00000320171

C

Seeded From UniProt

complete

enables

GO:0004743

pyruvate kinase activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P14618
ensembl:ENSP00000320171

F

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:A0A024R5Z9
ensembl:ENSP00000320171

C

Seeded From UniProt

complete

enables

GO:0000287

magnesium ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001697
InterPro:IPR015793

F

Seeded From UniProt

complete

enables

GO:0003824

catalytic activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR015813

F

Seeded From UniProt

complete

enables

GO:0004743

pyruvate kinase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001697
InterPro:IPR015793
InterPro:IPR015806
InterPro:IPR018209

F

Seeded From UniProt

complete

involved_in

GO:0006096

glycolytic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001697
InterPro:IPR015793
InterPro:IPR015806
InterPro:IPR018209

P

Seeded From UniProt

complete

enables

GO:0030955

potassium ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001697
InterPro:IPR015793

F

Seeded From UniProt

complete

enables

GO:0004743

pyruvate kinase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:2.7.1.40

F

Seeded From UniProt

complete

involved_in

GO:0008152

metabolic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0021

P

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

involved_in

GO:0006096

glycolytic process

GO_REF:0000037
GO_REF:0000041

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0324
UniPathway:UPA00109

P

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0067

F

Seeded From UniProt

complete

enables

GO:0003824

catalytic activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0021

F

Seeded From UniProt

complete

enables

GO:0016740

transferase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0808

F

Seeded From UniProt

complete

enables

GO:0016301

kinase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0418

F

Seeded From UniProt

complete

involved_in

GO:0016310

phosphorylation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0418

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 Parkison, C et al. (1991) The monomer of pyruvate kinase, subtype M1, is both a kinase and a cytosolic thyroid hormone binding protein. Biochem. Biophys. Res. Commun. 179 668-74 PubMed GONUTS page
  2. Hampton, A et al. (1982) Use of adenine nucleotide derivatives to assess the potential of exo-active-site-directed reagents as species- or isozyme-specific enzyme inactivators. 5. Interactions of adenosine 5'-triphosphate derivatives with rat pyruvate kinases, Escherichia coli thymidine kinase, and yeast and rat hexokinases. J. Med. Chem. 25 386-92 PubMed GONUTS page
  3. Wagner, KR et al. (1977) Developmental patterns of glycolytic enzymes in regenerating skeletal muscle after autogenous free grafting. J. Neurol. Sci. 34 373-90 PubMed GONUTS page
  4. 4.0 4.1 4.2 4.3 Gunn, JM & Taylor, CB (1973) Relationships between concentration of hepatic intermediary metabolites and induction of the key glycolytic enzymes in vivo. Biochem. J. 136 455-65 PubMed GONUTS page
  5. 5.0 5.1 5.2 Kashiwaya, Y et al. (1994) Control of glucose utilization in working perfused rat heart. J. Biol. Chem. 269 25502-14 PubMed GONUTS page
  6. Chatzipanagiotou, S et al. (1985) Alteration in the capacities as well as in the zonal and cellular distributions of pyruvate kinase L and M2 in regenerating rat liver. Biol. Chem. Hoppe-Seyler 366 271-80 PubMed GONUTS page
  7. Vereb, G et al. (1984) Effect of immobilization on some glycolytic enzymes of skeletal muscle. Acta Physiol Hung 63 55-61 PubMed GONUTS page
  8. Sawicka, TJ et al. () Metabolic adaptation of muscles to exercise, vibration and raised temperature under the influence of cernitins. Acta Physiol Pol 35 141-50 PubMed GONUTS page
  9. Stein, T et al. (2002) Energy metabolism pathways in rat muscle under conditions of simulated microgravity. J. Nutr. Biochem. 13 471 PubMed GONUTS page
  10. 10.0 10.1 Ratnakumari, L & Murthy, CR (1993) Response of rat cerebral glycolytic enzymes to hyperammonemic states. Neurosci. Lett. 161 37-40 PubMed GONUTS page
  11. Wu, SW et al. (1981) Biosynthesis of pyruvate kinase isozymes in rat liver. Eur. J. Biochem. 121 59-63 PubMed GONUTS page
  12. Webster, KA (1987) Regulation of glycolytic enzyme RNA transcriptional rates by oxygen availability in skeletal muscle cells. Mol. Cell. Biochem. 77 19-28 PubMed GONUTS page
  13. 13.0 13.1 13.2 13.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page