GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

RAT:KCC2A

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Rattus norvegicus (Rat). (10116)
Gene Name(s) Camk2a
Protein Name(s) Calcium/calmodulin-dependent protein kinase type II subunit alpha

CaM kinase II subunit alpha CaMK-II subunit alpha

External Links
UniProt P11275
EMBL J02942
M16960
M29699
PIR A30355
RefSeq NP_037052.1
UniGene Rn.107499
PDB 1CDM
1CM1
1CM4
PDBsum 1CDM
1CM1
1CM4
ProteinModelPortal P11275
SMR P11275
BioGrid 247435
DIP DIP-29639N
IntAct P11275
MINT MINT-153011
STRING 10116.ENSRNOP00000025283
BindingDB P11275
ChEMBL CHEMBL2359
GuidetoPHARMACOLOGY 1555
PhosphoSite P11275
PaxDb P11275
PRIDE P11275
GeneID 25400
KEGG rno:25400
UCSC RGD:2261
CTD 815
RGD 2261
eggNOG COG0515
HOVERGEN HBG108055
InParanoid P11275
KO K04515
PhylomeDB P11275
BRENDA 2.7.11.17
EvolutionaryTrace P11275
NextBio 606489
PMAP-CutDB P11275
Proteomes UP000002494
Genevestigator P11275
GO GO:0030054
GO:0030425
GO:0032839
GO:0005739
GO:0042734
GO:0005524
GO:0004683
GO:0035254
GO:0032794
GO:0004674
GO:0006816
GO:0000082
GO:0035235
GO:0018105
GO:0051928
GO:0010666
GO:0046777
GO:0006468
GO:1902108
GO:0048168
GO:0046928
GO:0002931
InterPro IPR020636
IPR013543
IPR011009
IPR000719
IPR017441
IPR002290
IPR008271
PANTHER PTHR24347
Pfam PF08332
PF00069
SMART SM00220
SUPFAM SSF56112
PROSITE PS00107
PS50011
PS00108

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:2001222

regulation of neuron migration

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9UQM7

P

Seeded From UniProt

complete

part_of

GO:0005739

mitochondrion

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P11798

C

part_of:(UBERON:0000948)

Seeded From UniProt

complete

involved_in

GO:1903076

regulation of protein localization to plasma membrane

PMID:19188609[1]

ECO:0000316

genetic interaction evidence used in manual assertion

ComplexPortal:CPX-1134,UniProtKB:P08413,UniProtKB:P11730,UniProtKB:P15791

P

Seeded From UniProt

complete

involved_in

GO:0099004

calmodulin dependent kinase signaling pathway

PMID:20670832[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0098989

NMDA selective glutamate receptor signaling pathway

PMID:20670832[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0099573

glutamatergic postsynaptic density

PMID:10102820[3]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0002608)

Seeded From UniProt

complete

part_of

GO:0099524

postsynaptic cytosol

PMID:10102820[3]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0002608)

Seeded From UniProt

complete

involved_in

GO:0098970

postsynaptic neurotransmitter receptor diffusion trapping

PMID:24894704[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0046928

regulation of neurotransmitter secretion

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P11798

P

Seeded From UniProt

complete

enables

GO:0035254

glutamate receptor binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P11798

F

Seeded From UniProt

complete

enables

GO:0004674

protein serine/threonine kinase activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P11798

F

has_direct_input:(MGI:MGI:1347359)

Seeded From UniProt

complete

enables

GO:0004674

protein serine/threonine kinase activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P11798

F

Seeded From UniProt

complete

involved_in

GO:1902108

regulation of mitochondrial membrane permeability involved in apoptotic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P11798

P

Seeded From UniProt

complete

involved_in

GO:0051928

positive regulation of calcium ion transport

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P11798

P

Seeded From UniProt

complete

involved_in

GO:0048168

regulation of neuronal synaptic plasticity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P11798

P

Seeded From UniProt

complete

involved_in

GO:0006468

protein phosphorylation

PMID:22514276[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0004683

calmodulin-dependent protein kinase activity

PMID:22514276[5]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0010666

positive regulation of cardiac muscle cell apoptotic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P11798

P

Seeded From UniProt

complete

involved_in

GO:0006816

calcium ion transport

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P11798

P

Seeded From UniProt

complete

involved_in

GO:0002931

response to ischemia

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P11798

P

Seeded From UniProt

complete

involved_in

GO:0000082

G1/S transition of mitotic cell cycle

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P11798

P

Seeded From UniProt

complete

part_of

GO:0043197

dendritic spine

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9UQM7

C

Seeded From UniProt

complete

part_of

GO:0005954

calcium- and calmodulin-dependent protein kinase complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9UQM7

C

Seeded From UniProt

complete

involved_in

GO:1990443

peptidyl-threonine autophosphorylation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9UQM7

P

Seeded From UniProt

complete

involved_in

GO:0060996

dendritic spine development

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9UQM7

P

Seeded From UniProt

complete

part_of

GO:0032839

dendrite cytoplasm

PMID:1419001[6]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0035235

ionotropic glutamate receptor signaling pathway

PMID:12223541[7]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0030425

dendrite

PMID:12223541[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0099524

postsynaptic cytosol

PMID:17957478[8]

ECO:0006003

electron microscopy evidence used in manual assertion

C

  • part_of:(GO:0098978)
  • part_of:(UBERON:0000061)
  • part_of:(UBERON:0002421)

Seeded From UniProt

complete

part_of

GO:0099523

presynaptic cytosol

PMID:17957478[8]

ECO:0006003

electron microscopy evidence used in manual assertion

C

  • part_of:(GO:0098978)
  • part_of:(UBERON:0000061)
  • part_of:(UBERON:0002421)

Seeded From UniProt

complete

part_of

GO:0098978

glutamatergic synapse

PMID:12202034[9]

ECO:0006063

over expression analysis evidence used in manual assertion

C

part_of:(UBERON:0002421)

Seeded From UniProt

complete

part_of

GO:0098978

glutamatergic synapse

PMID:12202034[9]

ECO:0006013

patch-clamp recording evidence used in manual assertion

C

part_of:(UBERON:0002421)

Seeded From UniProt

complete

part_of

GO:0098978

glutamatergic synapse

PMID:17957478[8]

ECO:0006003

electron microscopy evidence used in manual assertion

C

part_of:(UBERON:0002421)

Seeded From UniProt

complete

involved_in

GO:0098696

regulation of neurotransmitter receptor localization to postsynaptic specialization membrane

PMID:12202034[9]

ECO:0006063

over expression analysis evidence used in manual assertion

P

  • occurs_in:(GO:0098978)
  • occurs_in:(UBERON:0000061)
  • occurs_in:(UBERON:0002421)

Seeded From UniProt

complete

involved_in

GO:0098696

regulation of neurotransmitter receptor localization to postsynaptic specialization membrane

PMID:12202034[9]

ECO:0006013

patch-clamp recording evidence used in manual assertion

P

  • occurs_in:(GO:0098978)
  • occurs_in:(UBERON:0000061)
  • occurs_in:(UBERON:0002421)

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:20878786[10]

ECO:0006042

cell fractionation evidence used in manual assertion

C

part_of:(UBERON:0001890)

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:20878786[10]

ECO:0006003

electron microscopy evidence used in manual assertion

C

part_of:(UBERON:0001890)

Seeded From UniProt

complete

involved_in

GO:0046777

protein autophosphorylation

PMID:16095822[11]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0043025

neuronal cell body

PMID:7820660[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0032794

GTPase activating protein binding

PMID:12951199[13]

ECO:0000353

physical interaction evidence used in manual assertion

RGD:621090

F

Seeded From UniProt

complete

part_of

GO:0030425

dendrite

PMID:7820660[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0030424

axon

PMID:12176168[14]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0018105

peptidyl-serine phosphorylation

PMID:12951199[13]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

PMID:12951199[13]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:7820660[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0006468

protein phosphorylation

PMID:12401560[15]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:14688616[16]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:7820660[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0004683

calmodulin-dependent protein kinase activity

PMID:16095822[11]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0004683

calmodulin-dependent protein kinase activity

PMID:12951199[13]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0004683

calmodulin-dependent protein kinase activity

PMID:12401560[15]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0043005

neuron projection

PMID:21873635[17]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002389359
WB:WBGene00006779

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[17]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1341265
PANTHER:PTN002389359
RGD:2263

C

Seeded From UniProt

complete

enables

GO:0005516

calmodulin binding

PMID:21873635[17]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:88256
PANTHER:PTN002389359
UniProtKB:Q13557
UniProtKB:Q9UQM7

F

Seeded From UniProt

complete

enables

GO:0004683

calmodulin-dependent protein kinase activity

PMID:21873635[17]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0264607
MGI:MGI:88256
MGI:MGI:88257
PANTHER:PTN002389359
RGD:2261
RGD:2262
RGD:2263
RGD:621802
UniProtKB:Q13557
UniProtKB:Q9UQM7
WB:WBGene00006779

F

Seeded From UniProt

complete

part_of

GO:0099634

postsynaptic specialization membrane

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0098970

C

Seeded From UniProt

complete

enables

GO:0004672

protein kinase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000719
InterPro:IPR008271

F

Seeded From UniProt

complete

enables

GO:0004674

protein serine/threonine kinase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR039071

F

Seeded From UniProt

complete

enables

GO:0004683

calmodulin-dependent protein kinase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013543
InterPro:IPR039071

F

Seeded From UniProt

complete

enables

GO:0005516

calmodulin binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013543

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000719
InterPro:IPR017441

F

Seeded From UniProt

complete

involved_in

GO:0006468

protein phosphorylation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000719
InterPro:IPR008271
InterPro:IPR013543

P

Seeded From UniProt

complete

enables

GO:0004683

calmodulin-dependent protein kinase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:2.7.11.17

F

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

Reactome:R-RNO-9620437
Reactome:R-RNO-9619459
Reactome:R-RNO-9618659
Reactome:R-RNO-9618616
Reactome:R-RNO-9618605
Reactome:R-RNO-9617322

ECO:0000304

author statement supported by traceable reference used in manual assertion






C

Seeded From UniProt

complete

enables

GO:0016301

kinase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0418

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

enables

GO:0016740

transferase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0808

F

Seeded From UniProt

complete

part_of

GO:0045202

synapse

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0770
UniProtKB-SubCell:SL-0258

C

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

involved_in

GO:0016310

phosphorylation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0418

P

Seeded From UniProt

complete

part_of

GO:0042995

cell projection

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0966

C

Seeded From UniProt

complete

part_of

GO:0045211

postsynaptic membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0628

C

Seeded From UniProt

complete

enables

GO:0005516

calmodulin binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0112

F

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003

C

Seeded From UniProt

complete

part_of

GO:0030054

cell junction

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0965

C

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0067

F

Seeded From UniProt

complete

enables

GO:0004674

protein serine/threonine kinase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0723

F

Seeded From UniProt

complete

part_of

GO:0043197

dendritic spine

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0284

C

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0297

C

Seeded From UniProt

complete

part_of

GO:0030425

dendrite

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0283

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. De Felice, FG et al. (2009) Protection of synapses against Alzheimer's-linked toxins: insulin signaling prevents the pathogenic binding of Abeta oligomers. Proc. Natl. Acad. Sci. U.S.A. 106 1971-6 PubMed GONUTS page
  2. 2.0 2.1 Opazo, P et al. (2010) CaMKII triggers the diffusional trapping of surface AMPARs through phosphorylation of stargazin. Neuron 67 239-52 PubMed GONUTS page
  3. 3.0 3.1 Shen, K & Meyer, T (1999) Dynamic control of CaMKII translocation and localization in hippocampal neurons by NMDA receptor stimulation. Science 284 162-6 PubMed GONUTS page
  4. Petrini, EM et al. (2014) Synaptic recruitment of gephyrin regulates surface GABAA receptor dynamics for the expression of inhibitory LTP. Nat Commun 5 3921 PubMed GONUTS page
  5. 5.0 5.1 Ashpole, NM et al. (2012) Ca2+/calmodulin-dependent protein kinase II (CaMKII) regulates cardiac sodium channel NaV1.5 gating by multiple phosphorylation sites. J. Biol. Chem. 287 19856-69 PubMed GONUTS page
  6. Cho, KO et al. (1992) The rat brain postsynaptic density fraction contains a homolog of the Drosophila discs-large tumor suppressor protein. Neuron 9 929-42 PubMed GONUTS page
  7. 7.0 7.1 Dhavan, R et al. (2002) The cyclin-dependent kinase 5 activators p35 and p39 interact with the alpha-subunit of Ca2+/calmodulin-dependent protein kinase II and alpha-actinin-1 in a calcium-dependent manner. J. Neurosci. 22 7879-91 PubMed GONUTS page
  8. 8.0 8.1 8.2 Tao-Cheng, JH et al. (2006) Changes in the distribution of calcium calmodulin-dependent protein kinase II at the presynaptic bouton after depolarization. Brain Cell Biol 35 117-24 PubMed GONUTS page
  9. 9.0 9.1 9.2 9.3 Zhu, JJ et al. (2002) Ras and Rap control AMPA receptor trafficking during synaptic plasticity. Cell 110 443-55 PubMed GONUTS page
  10. 10.0 10.1 Swulius, MT et al. (2010) Structure and composition of the postsynaptic density during development. J. Comp. Neurol. 518 4243-60 PubMed GONUTS page
  11. 11.0 11.1 Price, TJ et al. (2005) Pharmacological interactions between calcium/calmodulin-dependent kinase II alpha and TRPV1 receptors in rat trigeminal sensory neurons. Neurosci. Lett. 389 94-8 PubMed GONUTS page
  12. 12.0 12.1 12.2 12.3 Ochiishi, T et al. (1994) Specific distribution of Ca2+/calmodulin-dependent protein kinase II alpha and beta isoforms in some structures of the rat forebrain. Brain Res. 659 179-93 PubMed GONUTS page
  13. 13.0 13.1 13.2 13.3 Song, B et al. (2003) Cerebral ischemia immediately increases serine phosphorylation of the synaptic RAS-GTPase activating protein SynGAP by calcium/calmodulin-dependent protein kinase II alpha in hippocampus of rats. Neurosci. Lett. 349 183-6 PubMed GONUTS page
  14. Carlton, SM (2002) Localization of CaMKIIalpha in rat primary sensory neurons: increase in inflammation. Brain Res. 947 252-9 PubMed GONUTS page
  15. 15.0 15.1 Meng, F & Zhang, G (2002) Autophosphorylated calcium/calmodulin-dependent protein kinase II alpha induced by cerebral ischemia immediately targets and phosphorylates N-methyl-D-aspartate receptor subunit 2B (NR2B) in hippocampus of rats. Neurosci. Lett. 333 59-63 PubMed GONUTS page
  16. Matsumoto, S et al. (2004) Protein kinase C-gamma and calcium/calmodulin-dependent protein kinase II-alpha are persistently translocated to cell membranes of the rat brain during and after middle cerebral artery occlusion. J. Cereb. Blood Flow Metab. 24 54-61 PubMed GONUTS page
  17. 17.0 17.1 17.2 17.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page