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RAT:EFGM
Contents
| Species (Taxon ID) | Rattus norvegicus (Rat). (10116) | |
| Gene Name(s) | Gfm1 (synonyms: Efg, Efg1, Gfm) | |
| Protein Name(s) | Elongation factor G, mitochondrial (ECO:0000255 with HAMAP-Rule:MF_03061)
EF-Gmt (ECO:0000255 with HAMAP-Rule:MF_03061) Elongation factor G 1, mitochondrial (ECO:0000255 with HAMAP-Rule:MF_03061) mEF-G 1 (ECO:0000255 with HAMAP-Rule:MF_03061) Elongation factor G1 (ECO:0000255 with HAMAP-Rule:MF_03061) | |
| External Links | ||
| UniProt | Q07803 | |
| EMBL | L14684 CH473976 BC085721 | |
| PIR | S40780 | |
| RefSeq | NP_446077.1 | |
| UniGene | Rn.10913 | |
| ProteinModelPortal | Q07803 | |
| STRING | 10116.ENSRNOP00000040081 | |
| PaxDb | Q07803 | |
| PRIDE | Q07803 | |
| Ensembl | ENSRNOT00000042079 | |
| GeneID | 114017 | |
| KEGG | rno:114017 | |
| UCSC | RGD:631396 | |
| CTD | 85476 | |
| RGD | 631396 | |
| eggNOG | COG0480 | |
| GeneTree | ENSGT00550000074911 | |
| HOGENOM | HOG000231585 | |
| InParanoid | Q07803 | |
| KO | K02355 | |
| OMA | KLTFVRM | |
| OrthoDB | EOG7VDXNM | |
| PhylomeDB | Q07803 | |
| TreeFam | TF105631 | |
| Reactome | REACT_270070 | |
| UniPathway | UPA00345 | |
| NextBio | 618156 | |
| PRO | PR:Q07803 | |
| Proteomes | UP000002494 | |
| ExpressionAtlas | Q07803 | |
| Genevestigator | Q07803 | |
| GO | GO:0005739 GO:0005525 GO:0003924 GO:0044822 GO:0003746 GO:0006184 GO:0070125 | |
| Gene3D | 3.30.230.10 3.30.70.240 3.40.50.300 | |
| HAMAP | MF_00054_B | |
| InterPro | IPR000795 IPR009022 IPR000640 IPR027417 IPR020568 IPR014721 IPR005225 IPR009000 IPR004540 IPR005517 IPR004161 | |
| Pfam | PF00679 PF14492 PF03764 PF00009 PF03144 | |
| PRINTS | PR00315 | |
| SMART | SM00838 SM00889 | |
| SUPFAM | SSF50447 SSF52540 SSF54211 SSF54980 | |
| TIGRFAMs | TIGR00484 TIGR00231 | |
| PROSITE | PS00301 PS51722 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0003746 |
translation elongation factor activity |
ECO:0000247 |
UniProtKB:P0A6M8 UniProtKB:P13551
|
F |
Fig. 3 |
complete | ||||
|
involved_in |
GO:0070125 |
mitochondrial translational elongation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003924 |
GTPase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003746 |
translation elongation factor activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0070125 |
mitochondrial translational elongation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000563009 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0263133 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003924 |
GTPase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002462392 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003746 |
translation elongation factor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002462392 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0070125 |
mitochondrial translational elongation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q96RP9 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003924 |
GTPase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q96RP9 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003746 |
translation elongation factor activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q96RP9 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003746 |
translation elongation factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003924 |
GTPase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005525 |
GTP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000795 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006414 |
translational elongation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003924 |
GTPase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000369139 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0070125 |
mitochondrial translational elongation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000369139 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003746 |
translation elongation factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000369139 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000369139 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005525 |
GTP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000369139 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005525 |
GTP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006414 |
translational elongation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniProtKB-KW:KW-0251 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006412 |
translation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003746 |
translation elongation factor activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Barker, C et al. (1993) Identification of the gene encoding the mitochondrial elongation factor G in mammals. Nucleic Acids Res. 21 2641-7 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
