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RAT:CFTR
Contents
Species (Taxon ID) | Rattus norvegicus (Rat). (10116) | |
Gene Name(s) | Cftr (synonyms: Abcc7) | |
Protein Name(s) | Cystic fibrosis transmembrane conductance regulator
CFTR ATP-binding cassette sub-family C member 7 Channel conductance-controlling ATPase cAMP-dependent chloride channel | |
External Links | ||
UniProt | P34158 | |
EMBL | DP000027 L26098 M89906 | |
PIR | I84733 | |
RefSeq | NP_113694.1 | |
UniGene | Rn.124539 | |
ProteinModelPortal | P34158 | |
SMR | P34158 | |
BioGrid | 246440 | |
STRING | 10116.ENSRNOP00000010981 | |
BindingDB | P34158 | |
ChEMBL | CHEMBL3992 | |
PhosphoSite | P34158 | |
PaxDb | P34158 | |
PRIDE | P34158 | |
Ensembl | ENSRNOT00000010981 | |
GeneID | 24255 | |
KEGG | rno:24255 | |
CTD | 1080 | |
RGD | 2332 | |
eggNOG | COG1132 | |
GeneTree | ENSGT00770000120479 | |
HOVERGEN | HBG004169 | |
InParanoid | P34158 | |
KO | K05031 | |
OMA | NALRRCF | |
OrthoDB | EOG7C2R0B | |
PhylomeDB | P34158 | |
TreeFam | TF105200 | |
Reactome | REACT_230681 | |
NextBio | 602781 | |
PRO | PR:P34158 | |
Proteomes | UP000002494 | |
Genevestigator | P34158 | |
GO | GO:0016324 GO:0016323 GO:0009986 GO:0034707 GO:0005737 GO:0030659 GO:0005769 GO:0031901 GO:0031205 GO:0070062 GO:0005902 GO:0005886 GO:0005524 GO:0015106 GO:0005260 GO:0005254 GO:0019869 GO:0015108 GO:0015701 GO:0007589 GO:0071320 GO:0032870 GO:1902476 GO:0006821 GO:0006695 GO:0030301 GO:0051454 GO:0015705 GO:0030324 GO:0060081 GO:0045909 GO:1902943 GO:0034097 GO:0042493 GO:0043627 GO:0043434 GO:0048240 GO:0030321 GO:0042311 GO:0006833 | |
Gene3D | 3.40.50.300 | |
InterPro | IPR003593 IPR011527 IPR003439 IPR017871 IPR009147 IPR025837 IPR027417 | |
PANTHER | PTHR24223:SF19 | |
Pfam | PF00664 PF00005 PF14396 | |
PRINTS | PR01851 | |
SMART | SM00382 | |
SUPFAM | SSF52540 SSF90123 | |
TIGRFAMs | TIGR01271 | |
PROSITE | PS50929 PS00211 PS50893 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0034976 |
response to endoplasmic reticulum stress |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050891 |
multicellular organismal water homeostasis |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035377 |
transepithelial water transport |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0015701 |
bicarbonate transport |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005789 |
endoplasmic reticulum membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0016887 |
ATPase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005260 |
intracellularly ATP-gated chloride channel activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:1902476 |
chloride transmembrane transport |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1904322 |
cellular response to forskolin |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071320 |
cellular response to cAMP |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060081 |
membrane hyperpolarization |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051454 |
intracellular pH elevation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048240 |
sperm capacitation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0019869 |
chloride channel inhibitor activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0015108 |
chloride transmembrane transporter activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0015106 |
bicarbonate transmembrane transporter activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005769 |
early endosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0005254 |
chloride channel activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0015106 |
bicarbonate transmembrane transporter activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000077 |
negative regulation of type B pancreatic cell development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1905460 |
negative regulation of vascular associated smooth muscle cell apoptotic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1904446 |
positive regulation of establishment of Sertoli cell barrier |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0097755 |
positive regulation of blood vessel diameter |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0097421 |
liver regeneration |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071454 |
cellular response to anoxia |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0043627 |
response to estrogen |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0043434 |
response to peptide hormone |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0043025 |
neuronal cell body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042493 |
response to drug |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042311 |
vasodilation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034605 |
cellular response to heat |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034097 |
response to cytokine |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0033005 |
positive regulation of mast cell activation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032870 |
cellular response to hormone stimulus |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0030659 |
cytoplasmic vesicle membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030425 |
dendrite |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030324 |
lung development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030321 |
transepithelial chloride transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016324 |
apical plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016323 |
basolateral plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0015705 |
iodide transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0015701 |
bicarbonate transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007568 |
aging |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006833 |
water transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006821 |
chloride transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005902 |
microvillus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0005769 |
early endosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:1902476 |
chloride transmembrane transport |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88388 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0055085 |
transmembrane transport |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000657997 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0042626 |
ATPase activity, coupled to transmembrane movement of substances |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000657997 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0016324 |
apical plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88388 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0016020 |
membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1352447 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0015701 |
bicarbonate transport |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000658665 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:2443111 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88388 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0005254 |
chloride channel activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR003439 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006811 |
ion transport |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0016887 |
ATPase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042626 |
ATPase activity, coupled to transmembrane movement of substances |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0055085 |
transmembrane transport |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006811 |
ion transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0034707 |
chloride channel complex |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005768 |
endosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0016853 |
isomerase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0005254 |
chloride channel activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006821 |
chloride transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016324 |
apical plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005789 |
endoplasmic reticulum membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0031901 |
early endosome membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0055038 |
recycling endosome membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Sharma, S et al. (2018) Localization of epithelial sodium channel (ENaC) and CFTR in the germinal epithelium of the testis, Sertoli cells, and spermatozoa. J. Mol. Histol. 49 195-208 PubMed GONUTS page
- ↑ Zertal-Zidani, S et al. (2013) Small-molecule inhibitors of the cystic fibrosis transmembrane conductance regulator increase pancreatic endocrine cell development in rat and mouse. Diabetologia 56 330-9 PubMed GONUTS page
- ↑ Zeng, JW et al. (2014) Cystic Fibrosis Transmembrane Conductance Regulator (CFTR) prevents apoptosis induced by hydrogen peroxide in basilar artery smooth muscle cells. Apoptosis 19 1317-29 PubMed GONUTS page
- ↑ 4.0 4.1 Chen, J et al. (2012) Cryptorchidism-induced CFTR down-regulation results in disruption of testicular tight junctions through up-regulation of NF-κB/COX-2/PGE2. Hum. Reprod. 27 2585-97 PubMed GONUTS page
- ↑ 5.0 5.1 Robert, R et al. (2007) Expression and function of cystic fibrosis transmembrane conductance regulator in rat intrapulmonary arteries. Eur. Respir. J. 30 857-64 PubMed GONUTS page
- ↑ Tran-Paterson, R et al. (1992) Expression and regulation of the cystic fibrosis gene during rat liver regeneration. Am. J. Physiol. 263 C55-60 PubMed GONUTS page
- ↑ Uramoto, H et al. (2003) Ischemia-induced enhancement of CFTR expression on the plasma membrane in neonatal rat ventricular myocytes. Jpn. J. Physiol. 53 357-65 PubMed GONUTS page
- ↑ Ajonuma, LC et al. (2005) Estrogen-induced abnormally high cystic fibrosis transmembrane conductance regulator expression results in ovarian hyperstimulation syndrome. Mol. Endocrinol. 19 3038-44 PubMed GONUTS page
- ↑ Novaira, HJ et al. (2006) Atrial natriuretic peptide modulates cystic fibrosis transmembrane conductance regulator chloride channel expression in rat proximal colon and human intestinal epithelial cells. J. Endocrinol. 189 155-65 PubMed GONUTS page
- ↑ 10.0 10.1 Mulberg, AE et al. (1994) Cystic fibrosis transmembrane conductance regulator protein expression in brain. Neuroreport 5 1684-8 PubMed GONUTS page
- ↑ Gu, X et al. (2006) Denopamine stimulates alveolar fluid clearance via cystic fibrosis transmembrane conductance regulator in rat lungs. Respirology 11 566-71 PubMed GONUTS page
- ↑ Valero, MS et al. (2006) Cystic fibrosis transmembrane conductance regulator (CFTR) chloride channel and Na-K-Cl cotransporter NKCC1 isoform mediate the vasorelaxant action of genistein in isolated rat aorta. Eur. J. Pharmacol. 544 126-31 PubMed GONUTS page
- ↑ Kulka, M et al. (2005) Differential regulation of cystic fibrosis transmembrane conductance regulator by interferon gamma in mast cells and epithelial cells. J. Pharmacol. Exp. Ther. 315 563-70 PubMed GONUTS page
- ↑ Kulka, M et al. (2002) Expression and functional characterization of CFTR in mast cells. J. Leukoc. Biol. 71 54-64 PubMed GONUTS page
- ↑ de Andrade Pinto, AC et al. (2007) Thyroid hormones stimulate renal expression of CFTR. Cell. Physiol. Biochem. 20 83-90 PubMed GONUTS page
- ↑ 16.0 16.1 Ameen, NA et al. (2000) Subcellular distribution of CFTR in rat intestine supports a physiologic role for CFTR regulation by vesicle traffic. Histochem. Cell Biol. 114 219-28 PubMed GONUTS page
- ↑ Cohen, JC & Larson, JE (2005) Pathophysiologic consequences following inhibition of a CFTR-dependent developmental cascade in the lung. BMC Dev. Biol. 5 2 PubMed GONUTS page
- ↑ Ishibashi, K et al. (2006) Roles of CLCA and CFTR in electrolyte re-absorption from rat saliva. J. Dent. Res. 85 1101-5 PubMed GONUTS page
- ↑ 19.0 19.1 19.2 Ogata, T (2006) Bicarbonate secretion by rat bile duct brush cells indicated by immunohistochemical localization of CFTR, anion exchanger AE2, Na+/HCO3 -cotransporter, carbonic anhydrase II, Na+/H+ exchangers NHE1 and NHE3, H+/K+-ATPase, and Na+/K+-ATPase. Med Mol Morphol 39 44-8 PubMed GONUTS page
- ↑ 20.0 20.1 Mizumori, M et al. (2009) Lubiprostone stimulates duodenal bicarbonate secretion in rats. Dig. Dis. Sci. 54 2063-9 PubMed GONUTS page
- ↑ Xie, C et al. (2015) Down-regulated CFTR During Aging Contributes to Benign Prostatic Hyperplasia. J. Cell. Physiol. 230 1906-15 PubMed GONUTS page
- ↑ Johnson, M et al. (2009) Characteristics of Cl- uptake in rat alveolar type I cells. Am. J. Physiol. Lung Cell Mol. Physiol. 297 L816-27 PubMed GONUTS page
- ↑ Webster, P et al. (1994) Subcellular localization of CFTR to endosomes in a ductal epithelium. Am. J. Physiol. 267 C340-8 PubMed GONUTS page
- ↑ 24.0 24.1 24.2 24.3 24.4 24.5 24.6 24.7 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
a
b
c
- GO:1904322 ! cellular response to forskolin
- GO:0071320 ! cellular response to cAMP
- GO:0071454 ! cellular response to anoxia
- GO:0032870 ! cellular response to hormone stimulus
- GO:0034605 ! cellular response to heat
- GO:0019869 ! chloride channel inhibitor activity
- GO:0005254 ! chloride channel activity
- GO:0034707 ! chloride channel complex
- GO:1902476 ! chloride transmembrane transport
- GO:0015108 ! chloride transmembrane transporter activity
- GO:0006821 ! chloride transport
- Chordata
- Craniata
- GO:0005737 ! cytoplasm
- GO:0030659 ! cytoplasmic vesicle membrane
- GO:0005829 ! cytosol
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