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PSEPA:PCYB

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Species (Taxon ID) Pseudomonas paucimobilis (Sphingomonas paucimobilis). (13689)
Gene Name(s) ligB
Protein Name(s) Protocatechuate 4,5-dioxygenase beta chain

4,5-PCD

External Links
UniProt P22636
EMBL M34835
PIR B35271
PDB 1B4U
1BOU
PDBsum 1B4U
1BOU
ProteinModelPortal P22636
SMR P22636
IntAct P22636
BioCyc MetaCyc:MONOMER-15117
EvolutionaryTrace P22636
GO GO:0008198
GO:0018579
GO:0019439
Gene3D 3.40.830.10
InterPro IPR004183
Pfam PF02900
SUPFAM SSF53213

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0006725

cellular aromatic compound metabolic process

PMID:15262932[1]

ECO:0000314

P

Fig 5. lanes 8 and 11 show the ability of ligB mutants to metabolize 3-O-methylgallate as a carbon source.

complete
CACAO 4956

involved_in

GO:0006725

cellular aromatic compound metabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004183

P

Seeded From UniProt

complete

enables

GO:0008198

ferrous iron binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004183

F

Seeded From UniProt

complete

enables

GO:0016491

oxidoreductase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004183

F

Seeded From UniProt

complete

enables

GO:0018579

protocatechuate 4,5-dioxygenase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR034937

F

Seeded From UniProt

complete

enables

GO:0018579

protocatechuate 4,5-dioxygenase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:1.13.11.8

F

Seeded From UniProt

complete

enables

GO:0051213

dioxygenase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0223

F

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0560

P

Seeded From UniProt

complete

involved_in

GO:0019439

aromatic compound catabolic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0058

P

Seeded From UniProt

complete

enables

GO:0016491

oxidoreductase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0560

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Kasai, D et al. (2004) Characterization of the 3-O-methylgallate dioxygenase gene and evidence of multiple 3-O-methylgallate catabolic pathways in Sphingomonas paucimobilis SYK-6. J. Bacteriol. 186 4951-9 PubMed GONUTS page