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PMID:8861917

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Citation

Kim, JL, Morgenstern, KA, Lin, C, Fox, T, Dwyer, MD, Landro, JA, Chambers, SP, Markland, W, Lepre, CA, O'Malley, ET, Harbeson, SL, Rice, CM, Murcko, MA, Caron, PR and Thomson, JA (1996) Crystal structure of the hepatitis C virus NS3 protease domain complexed with a synthetic NS4A cofactor peptide. Cell 87:343-55

Abstract

An estimated 1% of the global human population is infected by hepatitis C viruses (HCVs), and there are no broadly effective treatments for the debilitating progression of chronic hepatitis C. A serine protease located within the HCV NS3 protein processes the viral polyprotein at four specific sites and is considered essential for replication. Thus, it emerges as an attractive target for drug design. We report here the 2.5 angstrom resolution X-ray crystal structure of the NS3 protease domain complexed with a synthetic NS4A activator peptide. The protease has a chymotrypsin-like fold and features a tetrahedrally coordinated metal ion distal to the active site. The NS4A peptide intercalates within a beta sheet of the enzyme core.

Links

PubMed

Keywords

Amino Acid Sequence; Binding Sites; Crystallography, X-Ray; Enzyme Activation; Hepacivirus/enzymology; Macromolecular Substances; Models, Molecular; Molecular Sequence Data; Protein Binding; Protein Conformation; Sequence Alignment; Substrate Specificity; Viral Nonstructural Proteins/metabolism; Viral Nonstructural Proteins/ultrastructure; Zinc

Significance

Annotations

Gene product Qualifier GO Term Evidence Code with/from Aspect Extension Notes Status

HCVH:POLG

enables

GO:0004252: serine-type endopeptidase activity

ECO:0000314: direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

HCVH:POLG

enables

GO:0008270: zinc ion binding

ECO:0000314: direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

Notes

See also

References

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