GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
PMID:21071401
Citation |
Yeeles, JT, Gwynn, EJ, Webb, MR and Dillingham, MS (2011) The AddAB helicase-nuclease catalyses rapid and processive DNA unwinding using a single Superfamily 1A motor domain. Nucleic Acids Res. 39:2271-85 |
---|---|
Abstract |
The oligomeric state of Superfamily I DNA helicases is the subject of considerable and ongoing debate. While models based on crystal structures imply that a single helicase core domain is sufficient for DNA unwinding activity, biochemical data from several related enzymes suggest that a higher order oligomeric species is required. In this work we characterize the helicase activity of the AddAB helicase-nuclease, which is involved in the repair of double-stranded DNA breaks in Bacillus subtilis. We show that the enzyme is functional as a heterodimer of the AddA and AddB subunits, that it is a rapid and processive DNA helicase, and that it catalyses DNA unwinding using one single-stranded DNA motor of 3' → 5' polarity located in the AddA subunit. The AddB subunit contains a second putative ATP-binding pocket, but this does not contribute to the observed helicase activity and may instead be involved in the recognition of recombination hotspot sequences. |
Links |
PubMed PMC3064778 Online version:10.1093/nar/gkq1124 |
Keywords |
Amino Acid Motifs; Biocatalysis; DNA/metabolism; DNA Helicases/chemistry; DNA Helicases/genetics; DNA Helicases/metabolism; DNA, Single-Stranded/metabolism; Dimerization; Exodeoxyribonucleases/chemistry; Exodeoxyribonucleases/genetics; Exodeoxyribonucleases/metabolism; Mutation; Protein Structure, Tertiary; Protein Subunits/metabolism |
edit table |
Significance
Annotations
Gene product | Qualifier | GO Term | Evidence Code | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|
GO:0006302: double-strand break repair |
ECO:0000314: |
P |
Figure 5. A single helicase motor catalyses processive DNA unwinding by AddAB. |
complete | ||||
See also
References
See Help:References for how to manage references in GONUTS.