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LACF3:ADDA
Contents
Species (Taxon ID) | Lactobacillus fermentum (strain NBRC 3956 / LMG 18251). (334390) | |
Gene Name(s) | addA (ECO:0000255 with HAMAP-Rule:MF_01451) | |
Protein Name(s) | ATP-dependent helicase/nuclease subunit A (ECO:0000255 with HAMAP-Rule:MF_01451)
ATP-dependent helicase/nuclease AddA (ECO:0000255 with HAMAP-Rule:MF_01451) | |
External Links | ||
UniProt | B2GEY4 | |
EMBL | AP008937 | |
RefSeq | YP_001842853.1 | |
STRING | 334390.LAF_0037 | |
EnsemblBacteria | BAG26373 | |
GeneID | 6233610 | |
KEGG | lfe:LAF_0037 | |
PATRIC | 22224008 | |
eggNOG | COG1074 | |
HOGENOM | HOG000015621 | |
KO | K16898 | |
OMA | TADIGTM | |
OrthoDB | EOG6HJ22G | |
BioCyc | LFER334390:GJ2S-38-MONOMER | |
Proteomes | UP000001697 | |
GO | GO:0008408 GO:0005524 GO:0004003 GO:0003690 GO:0000724 | |
Gene3D | 3.40.50.300 3.90.320.10 | |
HAMAP | MF_01451 | |
InterPro | IPR014152 IPR014017 IPR000212 IPR011604 IPR027417 IPR011335 IPR014016 | |
PANTHER | PTHR11070 | |
Pfam | PF00580 PF13361 | |
SUPFAM | SSF52540 SSF52980 | |
TIGRFAMs | TIGR02785 | |
PROSITE | PS51198 PS51217 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0006302 |
double-strand break repair |
ECO:0000314 |
P |
Figure 5. A single helicase motor catalyses processive DNA unwinding by AddAB. |
complete | |||||
involved_in |
GO:0032508 |
DNA duplex unwinding |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004003 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032508 |
DNA duplex unwinding |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004003 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0008408 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004527 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004518 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004003 |
ATP-dependent DNA helicase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000212 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006302 |
double-strand break repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000053577 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0004003 |
ATP-dependent DNA helicase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000053577 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003690 |
double-stranded DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000053577 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000724 |
double-strand break repair via homologous recombination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000053577 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008408 |
3'-5' exonuclease activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000053577 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004527 |
exonuclease activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004518 |
nuclease activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004386 |
helicase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Yeeles, JT et al. (2011) The AddAB helicase-nuclease catalyses rapid and processive DNA unwinding using a single Superfamily 1A motor domain. Nucleic Acids Res. 39 2271-85 PubMed GONUTS page