GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
ORYSJ:SIZ1
Contents
| Species (Taxon ID) | Oryza sativa subsp. japonica (Rice). (39947) | |
| Gene Name(s) | SIZ1 | |
| Protein Name(s) | E3 SUMO-protein ligase SIZ1 | |
| External Links | ||
| UniProt | Q6L4L4 | |
| EMBL | AC134931 AP008211 AK105290 | |
| RefSeq | NP_001054517.1 | |
| UniGene | Os.4647 | |
| PDB | 2RNO 2RSD | |
| PDBsum | 2RNO 2RSD | |
| ProteinModelPortal | Q6L4L4 | |
| BioGrid | 806709 | |
| IntAct | Q6L4L4 | |
| MINT | MINT-8373540 | |
| EnsemblPlants | OS05T0125000-01 | |
| GeneID | 4337672 | |
| KEGG | osa:4337672 | |
| Gramene | Q6L4L4 | |
| eggNOG | NOG237400 | |
| InParanoid | Q6L4L4 | |
| UniPathway | UPA00886 | |
| EvolutionaryTrace | Q6L4L4 | |
| Proteomes | UP000000763 | |
| ExpressionAtlas | Q6L4L4 | |
| GO | GO:0005634 GO:0016874 GO:0003676 GO:0008270 GO:0016925 | |
| Gene3D | 1.10.720.30 3.30.40.10 | |
| InterPro | IPR003034 IPR019786 IPR011011 IPR004181 IPR001965 IPR019787 IPR013083 | |
| Pfam | PF00628 PF02037 PF02891 | |
| SMART | SM00249 SM00513 | |
| SUPFAM | SSF57903 | |
| PROSITE | PS50800 PS01359 PS51044 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0061665 |
SUMO ligase activity |
ECO:0000314 |
F |
Figure 5 shows when SIZ1 is expressed with AtSUMO1, sumoylation in high molecular weight range increases. This indicates SIZ1 may act as an E3 ligase. |
complete | |||||
| GO:0016925 |
protein sumoylation |
ECO:0000314 |
P |
Inferred from Figure 5, when SIZ1 expressed with AtSUMO1 sumoylation in high molecular weight range increased. |
complete | |||||
|
involved_in |
GO:0016925 |
protein sumoylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0061665 |
SUMO ligase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008270 |
zinc ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016925 |
protein sumoylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0019789 |
SUMO transferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0031668 |
cellular response to extracellular stimulus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016925 |
protein sumoylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00886 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
