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ORYSJ:ORC3
Contents
| Species (Taxon ID) | Oryza sativa subsp. japonica (Rice). (39947) | |
| Gene Name(s) | ORC3 (ECO:0000303 with PMID:15939553[1]) | |
| Protein Name(s) | Origin of replication complex subunit 3 (ECO:0000303 with PMID:15939553[1])
OsORC3 (ECO:0000303 with PMID:16100779[2]) | |
| External Links | ||
| UniProt | Q0IY07 | |
| EMBL | AB100408 AC083943 DP000086 AP008216 CM000147 | |
| RefSeq | NP_001064550.1 | |
| UniGene | Os.46783 | |
| PRIDE | Q0IY07 | |
| EnsemblPlants | OS10T0402200-00 | |
| GeneID | 4348571 | |
| KEGG | osa:4348571 | |
| Gramene | Q0IY07 | |
| eggNOG | KOG2538 | |
| HOGENOM | HOG000119238 | |
| InParanoid | Q0IY07 | |
| KO | K02605 | |
| OMA | DSLSSWY | |
| Proteomes | UP000000763 | |
| ExpressionAtlas | Q0IY07 | |
| GO | GO:0005664 GO:0003677 GO:0000911 GO:0006261 GO:0000724 GO:0009744 | |
| InterPro | IPR020795 | |
| PANTHER | PTHR12748 | |
| Pfam | PF07034 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0048527 |
lateral root development |
ECO:0000315 |
P |
See Figure 1. |
complete | |||||
|
involved_in |
GO:0048527 |
lateral root development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009744 |
response to sucrose |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0031261 |
DNA replication preinitiation complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000297471 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006270 |
DNA replication initiation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0005654 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006267 |
pre-replicative complex assembly involved in nuclear cell cycle DNA replication |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000297471 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005664 |
nuclear origin of replication recognition complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0005654 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005656 |
nuclear pre-replicative complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000297471 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003688 |
DNA replication origin binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000297471 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005664 |
nuclear origin of replication recognition complex |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006260 |
DNA replication |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006260 |
DNA replication |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Mori, Y et al. (2005) Characterization of the origin recognition complex (ORC) from a higher plant, rice (Oryza sativa L.). Gene 353 23-30 PubMed GONUTS page
- ↑ International Rice Genome Sequencing Project (2005) The map-based sequence of the rice genome. Nature 436 793-800 PubMed GONUTS page
- ↑ 3.0 3.1 Chen, X et al. (2013) OsORC3 is required for lateral root development in rice. Plant J. 74 339-50 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 4.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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