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ORYSJ:B8YIE8
Contents
Species (Taxon ID) | Oryza sativa subsp. japonica (Rice). (39947) | |
Gene Name(s) | DNG701 (ECO:0000313 with EMBL:ACL80319.1) | |
Protein Name(s) | DNA glycosylase/lyase 701 (ECO:0000313 with EMBL:ACL80319.1) | |
External Links | ||
UniProt | B8YIE8 | |
EMBL | FJ536320 | |
STRING | 39947.LOC_Os05g37350.1 | |
Gramene | B8YIE8 | |
eggNOG | COG0177 | |
ExpressionAtlas | B8YIE8 | |
GO | GO:0051539 GO:0016829 GO:0006284 | |
Gene3D | 1.10.1670.10 1.10.340.30 | |
InterPro | IPR011257 IPR003651 IPR003265 IPR023170 IPR028925 | |
Pfam | PF00730 PF15628 | |
SMART | SM00478 SM00525 | |
SUPFAM | SSF48150 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0051747 |
cytosine C-5 DNA demethylase activity |
ECO:0000315 |
F |
table 2 shows that the knockdown of DNG701 causes DNA Hypermethylation of Tos17 at 5m-cytosine in rice and table 3 shows that overexpression of DNG701 Leads to DNA hypomethylation in rice |
complete | |||||
involved_in |
GO:0080111 |
DNA demethylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0051747 |
cytosine C-5 DNA demethylase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006284 |
base-excision repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0051539 |
4 iron, 4 sulfur cluster binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0051536 |
iron-sulfur cluster binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0016829 |
lyase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 La, H et al. (2011) A 5-methylcytosine DNA glycosylase/lyase demethylates the retrotransposon Tos17 and promotes its transposition in rice. Proc. Natl. Acad. Sci. U.S.A. 108 15498-503 PubMed GONUTS page