GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

NEUCR:NIT2

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM1257 / FGSC 987). (367110)
Gene Name(s) nit-2 (synonyms: amr, pink)
Protein Name(s) Nitrogen catabolic enzyme regulatory protein

Nitrogen regulatory protein 2 NIT2

External Links
UniProt P19212
EMBL M33956
CM002236
PIR A34755
RefSeq XP_963796.2
ProteinModelPortal P19212
SMR P19212
STRING 5141.NCU09068.1
EnsemblFungi [example_ID EFNCRT00000008700]
GeneID 3879945
KEGG ncr:NCU09068
eggNOG COG5641
InParanoid P19212
KO K09184
OrthoDB EOG7TQVCN
Proteomes UP000001805
GO GO:0005634
GO:0043565
GO:0003700
GO:0008270
GO:0042128
GO:0006351
Gene3D 3.30.50.10
InterPro IPR013860
IPR000679
IPR013088
Pfam PF08550
PF00320
PRINTS PR00619
SMART SM00401
PROSITE PS00344
PS50114

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0044270

cellular nitrogen compound catabolic process

PMID:6450203[1]

ECO:0000314

P

Figure 6: nit-2 protein in N.crassa (strain 74-0R23-1A)component of non-histone chromosomal protein is 21,900 daltons.

complete
CACAO 9609

part_of

GO:0005634

nucleus

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003117
FB:FBgn0032223
FB:FBgn0038391
MGI:MGI:107516
MGI:MGI:109497
MGI:MGI:95661
MGI:MGI:95662
MGI:MGI:95663
MGI:MGI:95664
PANTHER:PTN001600628
PomBase:SPAC23E2.01
PomBase:SPCC1902.01
RGD:2663
RGD:2664
RGD:2665
RGD:2666
RGD:621250
SGD:S000000842
SGD:S000001742
SGD:S000001873
SGD:S000003646
UniProtKB:E1C9C6
UniProtKB:I3LUZ9
UniProtKB:P15976
UniProtKB:P17429
UniProtKB:P23769
UniProtKB:P23771
UniProtKB:P43691
UniProtKB:P43692
UniProtKB:P43694
UniProtKB:Q92908
UniProtKB:Q9BWX5
WB:WBGene00001186
WB:WBGene00001249
WB:WBGene00001250
WB:WBGene00001251
WB:WBGene00001252
WB:WBGene00001253
WB:WBGene00001310
WB:WBGene00001311
WB:WBGene00015981
ZFIN:ZDB-GENE-980526-340

C

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003117
MGI:MGI:95661
MGI:MGI:95664
PANTHER:PTN001600628
RGD:2665
SGD:S000001742
SGD:S000003646
UniProtKB:P23769
UniProtKB:P43694
UniProtKB:Q92908
WB:WBGene00001249
WB:WBGene00001310

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107516
MGI:MGI:95661
MGI:MGI:95662
MGI:MGI:95663
MGI:MGI:95664
PANTHER:PTN001600628
PomBase:SPAC23E2.01
PomBase:SPCC1902.01
SGD:S000000842
UniProtKB:P15976
UniProtKB:P23771

F

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0000981

P

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR039355

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000679
InterPro:IPR013088

P

Seeded From UniProt

complete

enables

GO:0008270

zinc ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000679
InterPro:IPR013088
InterPro:IPR039355

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000679

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0042128

nitrate assimilation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0534

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Grove, G & Marzluf, GA (1981) Identification of the product of the major regulatory gene of the nitrogen control circuit of Neurospora crassa as a nuclear DNA-binding protein. J. Biol. Chem. 256 463-70 PubMed GONUTS page
  2. 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page