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MOUSE:SHAN3

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Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Shank3 (synonyms: Kiaa1650, Prosap2)
Protein Name(s) SH3 and multiple ankyrin repeat domains protein 3

Shank3 Proline-rich synapse-associated protein 2 ProSAP2 SPANK-2

External Links
UniProt Q4ACU6
EMBL AJ245904
AB841411
AB841412
AC122401
AC137513
AB231013
AK173228
HQ405757
HQ405758
HQ405759
HQ405760
HQ405761
HQ405762
HQ405763
CCDS CCDS27754.1
RefSeq NP_067398.2
UniGene Mm.146855
PDB 3O5N
PDBsum 3O5N
ProteinModelPortal Q4ACU6
SMR Q4ACU6
BioGrid 208407
IntAct Q4ACU6
PhosphoSite Q4ACU6
PaxDb Q4ACU6
PRIDE Q4ACU6
Ensembl ENSMUST00000039074
ENSMUST00000066545
GeneID 58234
KEGG mmu:58234
UCSC uc007xha.2
uc007xhb.2
CTD 85358
MGI MGI:1930016
eggNOG COG0666
GeneTree ENSGT00510000046474
HOGENOM HOG000293276
HOVERGEN HBG054027
InParanoid Q4ACU6
KO K15009
OrthoDB EOG7GBFW2
PhylomeDB Q4ACU6
TreeFam TF324593
ChiTaRS Shank3
EvolutionaryTrace Q4ACU6
NextBio 314265
PRO PR:Q4ACU6
Proteomes UP000000589
Bgee Q4ACU6
CleanEx MM_SHANK3
ExpressionAtlas Q4ACU6
Genevestigator Q4ACU6
GO GO:0030054
GO:0060170
GO:0005737
GO:0043197
GO:0060076
GO:0043005
GO:0044309
GO:0097481
GO:0005886
GO:0045211
GO:0030160
GO:0042802
GO:0035255
GO:0008022
GO:0097110
GO:0017124
GO:0008270
GO:0097113
GO:0048854
GO:0060997
GO:0001838
GO:0097117
GO:0007612
GO:0035641
GO:0000165
GO:0007613
GO:0097114
GO:0032232
GO:0045794
GO:0050885
GO:2000969
GO:0060999
GO:2000463
GO:1900451
GO:0048170
GO:0051835
GO:0051968
GO:0097107
GO:2000822
GO:0061001
GO:2000821
GO:1900452
GO:1900271
GO:0035176
GO:0021773
GO:0007416
GO:0071625
Gene3D 1.10.150.50
1.25.40.20
2.30.42.10
InterPro IPR002110
IPR020683
IPR001478
IPR001660
IPR013761
IPR021129
IPR011511
IPR001452
Pfam PF12796
PF00595
PF00536
PF07653
SMART SM00248
SM00228
SM00454
SM00326
SUPFAM SSF47769
SSF48403
SSF50044
SSF50156
PROSITE PS50297
PS50088
PS50106
PS50105
PS50002

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0019717

synaptosome

PMID:21795692[1]

ECO:0000315

C

Mouse hippocampal neurons, figure 1C and D, there was reduction of shank3 protein in synaptosomes in hippocampal culture.

complete
CACAO 3088

GO:0061001

regulation of dendritic spine morphogenesis

PMID:21795692[1]

ECO:0000315

P

Figure 2C and 2D showed reduction in spinal number and width, also there was an increase in length in knockout Shank3 mouse hippocampal neurons.

complete
CACAO 3089

GO:0043406

positive regulation of MAP kinase activity

PMID:21795692[1]

ECO:0000315

P

Figure 3A, B shows that knockout Shank3 mice impaired ERK1/2 phosphorylation in neurons.

complete
CACAO 3090

GO:0032793

positive regulation of CREB transcription factor activity

PMID:21795692[1]

ECO:0000315

P

Figure 3A, B shows that knockout Shank3 mice impaired CREB phosphorylation in neurons.

complete
CACAO 3091

GO:2000463

positive regulation of excitatory postsynaptic membrane potential

PMID:21795692[1]

ECO:0000315

P

Figure 5A-F, Knockdown Shank3 reduced mEPSC frequency

complete
CACAO 3092

GO:0051968

positive regulation of synaptic transmission, glutamatergic

PMID:21795692[1]

ECO:0000315

P

Figure 5A-F, Knockdown Shank3 reduced mEPSC frequency. Figure 6A-D showed LTD mediated through mGluR5 impaired in Shank3 mutant mice.

complete
CACAO 3093

GO:0060292

long term synaptic depression

PMID:21795692[1]

ECO:0000315

P

Figure 6A-d shows that when DHPG is used to induce LTD in mEPSC in neurons with Shank3 expression but LTD was impaired when Shank3 was knocked down.

complete
CACAO 3094

GO:0097113

alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate receptor clustering

PMID:21795692[1]

ECO:0000315

P

Figure 6E and F, showed decrease in mutant Shank3 mice of GluR1 subunit of AMPA receptor cluster at plasma membrane of dendrites.

complete
CACAO 3095

GO:0035176

social behavior

PMID:21558424[2]

ECO:0000315

P

Control mice showed more affiliation with novel social stimulus than mutant Shank3 mice, figure 2A and B. Also when mice given choice of interacting with social or non-social stimulus, mutant Shank3 mice failed to show social affiliation compared to control. Similar results seen in figure 2C, mutant mice did not initiate the first social interaction.

complete
CACAO 3113

GO:0071625

vocalization behavior

PMID:21558424[2]

ECO:0000315

P

Ultrasonic vocalization investigated. Control Shank3 mice showed more vocal (figure 2G) and complex calls than mutant mice (figure 2H). Control mice showed more long duration calls than mutant Shank3 mice but the opposite was seen in mutant Shank3 where more short duration calls were made compared to wild type (figure 2I and J)

complete
CACAO 3114

GO:0050885

neuromuscular process controlling balance

PMID:21558424[2]

ECO:0000315

P

To test motor coordination, foot misplacement test was done where there is a arena comprised of 16 parallel stainless-steel rods spaced 6 mm apart. A touch-sensor is used to record when the mouse foot slipped (losing balance) between the bars and was recorded as a foot-fault. Figure 3A showed mutant mice had more foot faults than control.

complete
CACAO 3115

GO:0040011

locomotion

PMID:21558424[2]

ECO:0000315

P

Locomotion was decreased in mutant Shank3 mice compared to control (figure 3C)

complete
CACAO 3116

GO:0007612

learning

PMID:21558424[2]

ECO:0000315

P

Figure 3D and E showed that control increase in latency to fall off an accelerating rotorod compared to mutant male Shank3 mice where the latency did not change indicating no learning was taking place.

complete
CACAO 3117

GO:2000821

regulation of grooming behavior

PMID:21558424[2]

ECO:0000315

P

Shank3 mutant mice showed more self grooming behaviour compared to control, figure 3H

complete
CACAO 3118

GO:0035640

exploration behavior

PMID:21558424[2]

ECO:0000315

P

Novel object exploration was investigated from inside and outside the nest. Shank3 control mice made contact with novel object more often from outside than inside the nest whereas mutant Shank3 mice made contact with novel object more from inside the nest than outside the nest. Indicating less exploration behaviour in mutant mice compared to control. Similar results seen in figure 3G mutant mice made same location of contact against novel object where as control mice made contact as different locations of the novel object.

complete
CACAO 3119

GO:0007613

memory

PMID:21558424[2]

ECO:0000315

P

Morse water maze, mutant Shank3 mice showed more circular search swim patterns to the platform than control mice (supplementary material figure S4F top right). Also figure 4A right, when platform was changed, swim distance was the same for both control and mutant on day 7 but swim distance decreased after that for control but not for mutants. Figure 4A left showed that decline in swim distance over the first 3 day was less rapid in mutant Shank3 mice compared to control. Similar result seen in figure 4D, E G, H.

complete
CACAO 3120

GO:0060997

dendritic spine morphogenesis

PMID:21558424[2]

ECO:0000315

P

Figure 5C shows mutant Shank3 mice had longer dendritic spine compared to control. Figure 5I and J showed spine density was reduced and length was increased in CA1 hippocampus in four week old mice. Similar result seen in week 10 mice (figure 5K and L)

complete
CACAO 3121

GO:0097117

guanylate kinase-associated protein clustering

PMID:21558424[2]

ECO:0000315

P

Figure 6A and C, A decrease of PSD proteins in postsynaptic density fraction. There was a decrease in GKAP protein.

complete
CACAO 3122

GO:0097113

alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate receptor clustering

PMID:21558424[2]

ECO:0000315

P

Figure 6B and D, A decrease of receptor subunit in synaptosome membrane fraction. There was a decrease in GluA1 subunit in mutant Shank3 mice compared to control. Similar results was seen in figure 6E, confirmed by quantitative analyses.

complete
CACAO 3123

GO:0097114

N-methyl-D-aspartate receptor clustering

PMID:21558424[2]

ECO:0000315

P

Figure 6B and D, A decrease of receptor subunit in synaptosome membrane fraction. There was a decrease in NR2A subunit in mutant Shank3 mice compared to control.

complete
CACAO 3124

GO:0060291

long-term synaptic potentiation

PMID:21558424[2]

ECO:0000315

P

Figure 7A, mutant Shank3 mice showed reduced hippocampal long term potentiation compared to control.

complete
CACAO 3125

enables

GO:0043621

protein self-association

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9JLU4

F

Seeded From UniProt

complete

involved_in

GO:0061001

regulation of dendritic spine morphogenesis

PMID:21795692[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0060291

long-term synaptic potentiation

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0097114

NMDA glutamate receptor clustering

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0097113

AMPA glutamate receptor clustering

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0097117

guanylate kinase-associated protein clustering

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0060997

dendritic spine morphogenesis

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0007613

memory

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0035640

exploration behavior

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000821

regulation of grooming behavior

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0007612

learning

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0040011

locomotion

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0050885

neuromuscular process controlling balance

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071625

vocalization behavior

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0035176

social behavior

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0097113

AMPA glutamate receptor clustering

PMID:21795692[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0060292

long-term synaptic depression

PMID:21795692[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051968

positive regulation of synaptic transmission, glutamatergic

PMID:21795692[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000463

positive regulation of excitatory postsynaptic potential

PMID:21795692[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1900273

positive regulation of long-term synaptic potentiation

PMID:21167025[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000969

positive regulation of AMPA receptor activity

PMID:21423165[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000822

regulation of behavioral fear response

PMID:21423165[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000821

regulation of grooming behavior

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000821

regulation of grooming behavior

PMID:21423165[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000463

positive regulation of excitatory postsynaptic potential

PMID:21795692[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

occurs_in:(CL:0002608)

Seeded From UniProt

complete

involved_in

GO:2000463

positive regulation of excitatory postsynaptic potential

PMID:21423165[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000463

positive regulation of excitatory postsynaptic potential

PMID:21167025[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1900452

regulation of long-term synaptic depression

PMID:21795692[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

occurs_in:(CL:0002608)

Seeded From UniProt

complete

involved_in

GO:1900451

positive regulation of glutamate receptor signaling pathway

PMID:21795692[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

occurs_in:(CL:0002608)

Seeded From UniProt

complete

involved_in

GO:1900271

regulation of long-term synaptic potentiation

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9JLU4

C

Seeded From UniProt

complete

involved_in

GO:0097117

guanylate kinase-associated protein clustering

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0097114

NMDA glutamate receptor clustering

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0097113

AMPA glutamate receptor clustering

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0097113

AMPA glutamate receptor clustering

PMID:21795692[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

occurs_in:(CL:0002608)

Seeded From UniProt

complete

enables

GO:0097110

scaffold protein binding

PMID:16606358[5]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q62108

F

Seeded From UniProt

complete

involved_in

GO:0097107

postsynaptic density assembly

PMID:21423165[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071625

vocalization behavior

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0071625

vocalization behavior

PMID:21167025[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0061001

regulation of dendritic spine morphogenesis

PMID:21795692[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

occurs_in:(CL:0002608)

Seeded From UniProt

complete

involved_in

GO:0060999

positive regulation of dendritic spine development

PMID:21795692[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

occurs_in:(CL:0002608)

Seeded From UniProt

complete

involved_in

GO:0060997

dendritic spine morphogenesis

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0060997

dendritic spine morphogenesis

PMID:21423165[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0060997

dendritic spine morphogenesis

PMID:21167025[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0060170

ciliary membrane

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9JLU4

C

Seeded From UniProt

complete

part_of

GO:0060076

excitatory synapse

PMID:21423165[4]

ECO:0000305

curator inference used in manual assertion

GO:0051968

C

Seeded From UniProt

complete

involved_in

GO:0051968

positive regulation of synaptic transmission, glutamatergic

PMID:21795692[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

occurs_in:(CL:0002608)

Seeded From UniProt

complete

involved_in

GO:0051968

positive regulation of synaptic transmission, glutamatergic

PMID:21423165[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051968

positive regulation of synaptic transmission, glutamatergic

PMID:21167025[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051835

positive regulation of synapse structural plasticity

PMID:21167025[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0050885

neuromuscular process controlling balance

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048854

brain morphogenesis

PMID:21423165[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048170

positive regulation of long-term neuronal synaptic plasticity

PMID:21167025[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045794

negative regulation of cell volume

PMID:21423165[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • occurs_in:(CL:0002319)
  • occurs_in:(UBERON:0000955)

Seeded From UniProt

complete

part_of

GO:0044309

neuron spine

PMID:16606358[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0043005

neuron projection

PMID:21795692[1]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0002608)

Seeded From UniProt

complete

involved_in

GO:0035641

locomotory exploration behavior

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0035641

locomotory exploration behavior

PMID:21423165[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0035255

ionotropic glutamate receptor binding

PMID:15207857[6]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q61625

F

Seeded From UniProt

complete

enables

GO:0035255

ionotropic glutamate receptor binding

PMID:16606358[5]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P23818

F

Seeded From UniProt

complete

involved_in

GO:0035176

social behavior

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0035176

social behavior

PMID:21423165[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0035176

social behavior

PMID:21167025[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0030160

GKAP/Homer scaffold activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9JLU4

F

Seeded From UniProt

complete

involved_in

GO:0021773

striatal medium spiny neuron differentiation

PMID:21423165[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0017124

SH3 domain binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9JLU4

F

Seeded From UniProt

complete

enables

GO:0008270

zinc ion binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9JLU4

F

Seeded From UniProt

complete

enables

GO:0008022

protein C-terminus binding

PMID:16606358[5]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P23818

F

Seeded From UniProt

complete

involved_in

GO:0007613

memory

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0007612

learning

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0007416

synapse assembly

PMID:21423165[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0031234

extrinsic component of cytoplasmic side of plasma membrane

PMID:16606358[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0098978

glutamatergic synapse

PMID:27161151[7]

ECO:0006042

cell fractionation evidence used in manual assertion

C

  • part_of:(UBERON:0000061)
  • part_of:(UBERON:0002435)

Seeded From UniProt

complete

part_of

GO:0098978

glutamatergic synapse

PMID:27161151[7]

ECO:0005589

confocal microscopy evidence used in manual assertion

C

  • part_of:(UBERON:0000061)
  • part_of:(UBERON:0002435)

Seeded From UniProt

complete

part_of

GO:0098978

glutamatergic synapse

PMID:27161151[7]

ECO:0001225

knockout evidence used in manual assertion

C

  • part_of:(UBERON:0000061)
  • part_of:(UBERON:0002435)

Seeded From UniProt

complete

part_of

GO:0098978

glutamatergic synapse

PMID:27161151[7]

ECO:0000279

western blot evidence used in manual assertion

C

  • part_of:(UBERON:0000061)
  • part_of:(UBERON:0002435)

Seeded From UniProt

complete

enables

GO:0098919

structural constituent of postsynaptic density

PMID:27161151[7]

ECO:0006042

cell fractionation evidence used in manual assertion

F

  • occurs_in:(GO:0098978)
  • occurs_in:(UBERON:0000061)
  • occurs_in:(UBERON:0002435)

Seeded From UniProt

complete

enables

GO:0098919

structural constituent of postsynaptic density

PMID:27161151[7]

ECO:0005589

confocal microscopy evidence used in manual assertion

F

  • occurs_in:(GO:0098978)
  • occurs_in:(UBERON:0000061)
  • occurs_in:(UBERON:0002435)

Seeded From UniProt

complete

enables

GO:0098919

structural constituent of postsynaptic density

PMID:27161151[7]

ECO:0001225

knockout evidence used in manual assertion

F

  • occurs_in:(GO:0098978)
  • occurs_in:(UBERON:0000061)
  • occurs_in:(UBERON:0002435)

Seeded From UniProt

complete

enables

GO:0098919

structural constituent of postsynaptic density

PMID:27161151[7]

ECO:0000279

western blot evidence used in manual assertion

F

  • occurs_in:(GO:0098978)
  • occurs_in:(UBERON:0000061)
  • occurs_in:(UBERON:0002435)

Seeded From UniProt

complete

involved_in

GO:2000463

positive regulation of excitatory postsynaptic potential

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1930016
MGI:MGI:3613677
PANTHER:PTN001191880

P

Seeded From UniProt

complete

involved_in

GO:2000311

regulation of AMPA receptor activity

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:3613677
PANTHER:PTN001191880

P

Seeded From UniProt

complete

involved_in

GO:0097107

postsynaptic density assembly

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1930016
PANTHER:PTN001191880

P

Seeded From UniProt

complete

involved_in

GO:0060999

positive regulation of dendritic spine development

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1930016
PANTHER:PTN001191880
RGD:621011

P

Seeded From UniProt

complete

involved_in

GO:0060997

dendritic spine morphogenesis

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1930016
MGI:MGI:3613677
PANTHER:PTN001191880

P

Seeded From UniProt

complete

involved_in

GO:0060291

long-term synaptic potentiation

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1930016
MGI:MGI:2671987
PANTHER:PTN001191880

P

Seeded From UniProt

complete

involved_in

GO:0051968

positive regulation of synaptic transmission, glutamatergic

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1930016
MGI:MGI:2671987
PANTHER:PTN001191880

P

Seeded From UniProt

complete

involved_in

GO:0051124

synaptic growth at neuromuscular junction

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0040752
PANTHER:PTN001191880

P

Seeded From UniProt

complete

involved_in

GO:0048854

brain morphogenesis

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1930016
PANTHER:PTN001191880
ZFIN:ZDB-GENE-060503-369

P

Seeded From UniProt

complete

colocalizes_with

GO:0045211

postsynaptic membrane

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:2671987
MGI:MGI:3613677
PANTHER:PTN001191880
RGD:621011

C

Seeded From UniProt

complete

part_of

GO:0044309

neuron spine

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1930016
PANTHER:PTN001191880

C

Seeded From UniProt

complete

part_of

GO:0043197

dendritic spine

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:2671987
MGI:MGI:3613677
PANTHER:PTN001191880
RGD:621011

C

Seeded From UniProt

complete

part_of

GO:0043005

neuron projection

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1930016
MGI:MGI:2671987
MGI:MGI:3613677
PANTHER:PTN001191880

C

Seeded From UniProt

complete

enables

GO:0035255

ionotropic glutamate receptor binding

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1930016
MGI:MGI:2671987
MGI:MGI:3613677
PANTHER:PTN001191878
RGD:621011

F

Seeded From UniProt

complete

part_of

GO:0030425

dendrite

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:3613677
PANTHER:PTN001191880

C

Seeded From UniProt

complete

enables

GO:0030160

GKAP/Homer scaffold activity

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:3613677
PANTHER:PTN001191878
RGD:621011
RGD:69264

F

Seeded From UniProt

complete

enables

GO:0030159

receptor signaling complex adaptor activity

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001191878
RGD:621011

F

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0040752
MGI:MGI:3613677
PANTHER:PTN001191880
RGD:628772
RGD:69264

C

Seeded From UniProt

complete

colocalizes_with

GO:0008328

ionotropic glutamate receptor complex

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:2671987
MGI:MGI:3613677
PANTHER:PTN001191878

C

Seeded From UniProt

complete

involved_in

GO:0007416

synapse assembly

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1930016
MGI:MGI:2671987
PANTHER:PTN001191880

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:1904717

regulation of AMPA glutamate receptor clustering

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:5056336

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:1900451

positive regulation of glutamate receptor signaling pathway

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

P

Seeded From UniProt

complete

part_of

GO:0099092

postsynaptic density, intracellular component

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

C

Seeded From UniProt

complete

part_of

GO:0098978

glutamatergic synapse

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

C

Seeded From UniProt

complete

enables

GO:0098919

structural constituent of postsynaptic density

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

F

Seeded From UniProt

complete

enables

GO:0097110

scaffold protein binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0071625

vocalization behavior

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:5056336

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0071625

vocalization behavior

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9BYB0

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060997

dendritic spine morphogenesis

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:5056336

P

Seeded From UniProt

complete

part_of

GO:0060170

ciliary membrane

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051259

protein complex oligomerization

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0050807

regulation of synapse organization

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048167

regulation of synaptic plasticity

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:5056336

P

Seeded From UniProt

complete

part_of

GO:0045202

synapse

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

C

Seeded From UniProt

complete

enables

GO:0043621

protein self-association

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

F

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0042297

vocal learning

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9BYB0

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0035176

social behavior

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:5056336

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0035176

social behavior

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9BYB0

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0032232

negative regulation of actin filament bundle assembly

PMID:19208628[9]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0030534

adult behavior

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9BYB0

P

Seeded From UniProt

complete

enables

GO:0030160

GKAP/Homer scaffold activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

F

Seeded From UniProt

complete

enables

GO:0017124

SH3 domain binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

F

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

C

Seeded From UniProt

complete

enables

GO:0008270

zinc ion binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

F

Seeded From UniProt

complete

enables

GO:0008022

protein C-terminus binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:69264

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007626

locomotory behavior

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:5056336

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007612

learning

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9BYB0

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007611

learning or memory

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:5056336

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001838

embryonic epithelial tube formation

PMID:15569713[10]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:97902

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000165

MAPK cascade

PMID:15569713[10]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:95805
MGI:MGI:97902

P

Seeded From UniProt

complete

involved_in

GO:0099562

maintenance of postsynaptic density structure

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0098919

P

Seeded From UniProt

complete

involved_in

GO:0099562

maintenance of postsynaptic density structure

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0098919

P

Seeded From UniProt

complete

involved_in

GO:0099562

maintenance of postsynaptic density structure

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0098919

P

Seeded From UniProt

complete

involved_in

GO:0099562

maintenance of postsynaptic density structure

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0098919

P

Seeded From UniProt

complete

involved_in

GO:0099562

maintenance of postsynaptic density structure

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0098919

P

Seeded From UniProt

complete

part_of

GO:0043005

neuron projection

PMID:26627310[11]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

part_of

GO:0045211

postsynaptic membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0628

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003

C

Seeded From UniProt

complete

part_of

GO:0042995

cell projection

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0966

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0030054

cell junction

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0965

C

Seeded From UniProt

complete

enables

GO:0003779

actin binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0009

F

Seeded From UniProt

complete

part_of

GO:0045202

synapse

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0770
UniProtKB-SubCell:SL-0258

C

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0297

C

Seeded From UniProt

complete

part_of

GO:0043197

dendritic spine

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0284

C

Seeded From UniProt

complete

part_of

GO:0120038

plasma membrane bounded cell projection part

PMID:26627310[11]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0017146

NMDA selective glutamate receptor complex

PMID:26627310[11]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 1.13 1.14 1.15 1.16 1.17 1.18 1.19 1.20 Verpelli, C et al. (2011) Importance of Shank3 protein in regulating metabotropic glutamate receptor 5 (mGluR5) expression and signaling at synapses. J. Biol. Chem. 286 34839-50 PubMed GONUTS page
  2. 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 2.18 2.19 2.20 2.21 2.22 2.23 2.24 2.25 2.26 2.27 2.28 2.29 2.30 2.31 2.32 2.33 2.34 2.35 2.36 2.37 2.38 2.39 2.40 2.41 2.42 2.43 2.44 Wang, X et al. (2011) Synaptic dysfunction and abnormal behaviors in mice lacking major isoforms of Shank3. Hum. Mol. Genet. 20 3093-108 PubMed GONUTS page
  3. 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 Bozdagi, O et al. (2010) Haploinsufficiency of the autism-associated Shank3 gene leads to deficits in synaptic function, social interaction, and social communication. Mol Autism 1 15 PubMed GONUTS page
  4. 4.00 4.01 4.02 4.03 4.04 4.05 4.06 4.07 4.08 4.09 4.10 4.11 4.12 4.13 Peça, J et al. (2011) Shank3 mutant mice display autistic-like behaviours and striatal dysfunction. Nature 472 437-42 PubMed GONUTS page
  5. 5.0 5.1 5.2 5.3 5.4 Uchino, S et al. (2006) Direct interaction of post-synaptic density-95/Dlg/ZO-1 domain-containing synaptic molecule Shank3 with GluR1 alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionic acid receptor. J. Neurochem. 97 1203-14 PubMed GONUTS page
  6. Uemura, T et al. (2004) Direct interaction of GluRdelta2 with Shank scaffold proteins in cerebellar Purkinje cells. Mol. Cell. Neurosci. 26 330-41 PubMed GONUTS page
  7. 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.7 Wang, X et al. (2016) Altered mGluR5-Homer scaffolds and corticostriatal connectivity in a Shank3 complete knockout model of autism. Nat Commun 7 11459 PubMed GONUTS page
  8. 8.00 8.01 8.02 8.03 8.04 8.05 8.06 8.07 8.08 8.09 8.10 8.11 8.12 8.13 8.14 8.15 8.16 8.17 8.18 8.19 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  9. Sawallisch, C et al. (2009) The insulin receptor substrate of 53 kDa (IRSp53) limits hippocampal synaptic plasticity. J. Biol. Chem. 284 9225-36 PubMed GONUTS page
  10. 10.0 10.1 Schuetz, G et al. (2004) The neuronal scaffold protein Shank3 mediates signaling and biological function of the receptor tyrosine kinase Ret in epithelial cells. J. Cell Biol. 167 945-52 PubMed GONUTS page
  11. 11.0 11.1 11.2 Berg, JM et al. (2015) JAKMIP1, a Novel Regulator of Neuronal Translation, Modulates Synaptic Function and Autistic-like Behaviors in Mouse. Neuron 88 1173-1191 PubMed GONUTS page