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MOUSE:SHAN3
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Shank3 (synonyms: Kiaa1650, Prosap2) | |
Protein Name(s) | SH3 and multiple ankyrin repeat domains protein 3
Shank3 Proline-rich synapse-associated protein 2 ProSAP2 SPANK-2 | |
External Links | ||
UniProt | Q4ACU6 | |
EMBL | AJ245904 AB841411 AB841412 AC122401 AC137513 AB231013 AK173228 HQ405757 HQ405758 HQ405759 HQ405760 HQ405761 HQ405762 HQ405763 | |
CCDS | CCDS27754.1 | |
RefSeq | NP_067398.2 | |
UniGene | Mm.146855 | |
PDB | 3O5N | |
PDBsum | 3O5N | |
ProteinModelPortal | Q4ACU6 | |
SMR | Q4ACU6 | |
BioGrid | 208407 | |
IntAct | Q4ACU6 | |
PhosphoSite | Q4ACU6 | |
PaxDb | Q4ACU6 | |
PRIDE | Q4ACU6 | |
Ensembl | ENSMUST00000039074 ENSMUST00000066545 | |
GeneID | 58234 | |
KEGG | mmu:58234 | |
UCSC | uc007xha.2 uc007xhb.2 | |
CTD | 85358 | |
MGI | MGI:1930016 | |
eggNOG | COG0666 | |
GeneTree | ENSGT00510000046474 | |
HOGENOM | HOG000293276 | |
HOVERGEN | HBG054027 | |
InParanoid | Q4ACU6 | |
KO | K15009 | |
OrthoDB | EOG7GBFW2 | |
PhylomeDB | Q4ACU6 | |
TreeFam | TF324593 | |
ChiTaRS | Shank3 | |
EvolutionaryTrace | Q4ACU6 | |
NextBio | 314265 | |
PRO | PR:Q4ACU6 | |
Proteomes | UP000000589 | |
Bgee | Q4ACU6 | |
CleanEx | MM_SHANK3 | |
ExpressionAtlas | Q4ACU6 | |
Genevestigator | Q4ACU6 | |
GO | GO:0030054 GO:0060170 GO:0005737 GO:0043197 GO:0060076 GO:0043005 GO:0044309 GO:0097481 GO:0005886 GO:0045211 GO:0030160 GO:0042802 GO:0035255 GO:0008022 GO:0097110 GO:0017124 GO:0008270 GO:0097113 GO:0048854 GO:0060997 GO:0001838 GO:0097117 GO:0007612 GO:0035641 GO:0000165 GO:0007613 GO:0097114 GO:0032232 GO:0045794 GO:0050885 GO:2000969 GO:0060999 GO:2000463 GO:1900451 GO:0048170 GO:0051835 GO:0051968 GO:0097107 GO:2000822 GO:0061001 GO:2000821 GO:1900452 GO:1900271 GO:0035176 GO:0021773 GO:0007416 GO:0071625 | |
Gene3D | 1.10.150.50 1.25.40.20 2.30.42.10 | |
InterPro | IPR002110 IPR020683 IPR001478 IPR001660 IPR013761 IPR021129 IPR011511 IPR001452 | |
Pfam | PF12796 PF00595 PF00536 PF07653 | |
SMART | SM00248 SM00228 SM00454 SM00326 | |
SUPFAM | SSF47769 SSF48403 SSF50044 SSF50156 | |
PROSITE | PS50297 PS50088 PS50106 PS50105 PS50002 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0019717 |
synaptosome |
ECO:0000315 |
C |
Mouse hippocampal neurons, figure 1C and D, there was reduction of shank3 protein in synaptosomes in hippocampal culture. |
complete | |||||
GO:0061001 |
regulation of dendritic spine morphogenesis |
ECO:0000315 |
P |
Figure 2C and 2D showed reduction in spinal number and width, also there was an increase in length in knockout Shank3 mouse hippocampal neurons. |
complete | |||||
GO:0043406 |
positive regulation of MAP kinase activity |
ECO:0000315 |
P |
Figure 3A, B shows that knockout Shank3 mice impaired ERK1/2 phosphorylation in neurons. |
complete | |||||
GO:0032793 |
positive regulation of CREB transcription factor activity |
ECO:0000315 |
P |
Figure 3A, B shows that knockout Shank3 mice impaired CREB phosphorylation in neurons. |
complete | |||||
GO:2000463 |
positive regulation of excitatory postsynaptic membrane potential |
ECO:0000315 |
P |
Figure 5A-F, Knockdown Shank3 reduced mEPSC frequency |
complete | |||||
GO:0051968 |
positive regulation of synaptic transmission, glutamatergic |
ECO:0000315 |
P |
Figure 5A-F, Knockdown Shank3 reduced mEPSC frequency. Figure 6A-D showed LTD mediated through mGluR5 impaired in Shank3 mutant mice. |
complete | |||||
GO:0060292 |
long term synaptic depression |
ECO:0000315 |
P |
Figure 6A-d shows that when DHPG is used to induce LTD in mEPSC in neurons with Shank3 expression but LTD was impaired when Shank3 was knocked down. |
complete | |||||
GO:0097113 |
alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate receptor clustering |
ECO:0000315 |
P |
Figure 6E and F, showed decrease in mutant Shank3 mice of GluR1 subunit of AMPA receptor cluster at plasma membrane of dendrites. |
complete | |||||
GO:0035176 |
social behavior |
ECO:0000315 |
P |
Control mice showed more affiliation with novel social stimulus than mutant Shank3 mice, figure 2A and B. Also when mice given choice of interacting with social or non-social stimulus, mutant Shank3 mice failed to show social affiliation compared to control. Similar results seen in figure 2C, mutant mice did not initiate the first social interaction. |
complete | |||||
GO:0071625 |
vocalization behavior |
ECO:0000315 |
P |
Ultrasonic vocalization investigated. Control Shank3 mice showed more vocal (figure 2G) and complex calls than mutant mice (figure 2H). Control mice showed more long duration calls than mutant Shank3 mice but the opposite was seen in mutant Shank3 where more short duration calls were made compared to wild type (figure 2I and J) |
complete | |||||
GO:0050885 |
neuromuscular process controlling balance |
ECO:0000315 |
P |
To test motor coordination, foot misplacement test was done where there is a arena comprised of 16 parallel stainless-steel rods spaced 6 mm apart. A touch-sensor is used to record when the mouse foot slipped (losing balance) between the bars and was recorded as a foot-fault. Figure 3A showed mutant mice had more foot faults than control. |
complete | |||||
GO:0040011 |
locomotion |
ECO:0000315 |
P |
Locomotion was decreased in mutant Shank3 mice compared to control (figure 3C) |
complete | |||||
GO:0007612 |
learning |
ECO:0000315 |
P |
Figure 3D and E showed that control increase in latency to fall off an accelerating rotorod compared to mutant male Shank3 mice where the latency did not change indicating no learning was taking place. |
complete | |||||
GO:2000821 |
regulation of grooming behavior |
ECO:0000315 |
P |
Shank3 mutant mice showed more self grooming behaviour compared to control, figure 3H |
complete | |||||
GO:0035640 |
exploration behavior |
ECO:0000315 |
P |
Novel object exploration was investigated from inside and outside the nest. Shank3 control mice made contact with novel object more often from outside than inside the nest whereas mutant Shank3 mice made contact with novel object more from inside the nest than outside the nest. Indicating less exploration behaviour in mutant mice compared to control. Similar results seen in figure 3G mutant mice made same location of contact against novel object where as control mice made contact as different locations of the novel object. |
complete | |||||
GO:0007613 |
memory |
ECO:0000315 |
P |
Morse water maze, mutant Shank3 mice showed more circular search swim patterns to the platform than control mice (supplementary material figure S4F top right). Also figure 4A right, when platform was changed, swim distance was the same for both control and mutant on day 7 but swim distance decreased after that for control but not for mutants. Figure 4A left showed that decline in swim distance over the first 3 day was less rapid in mutant Shank3 mice compared to control. Similar result seen in figure 4D, E G, H. |
complete | |||||
GO:0060997 |
dendritic spine morphogenesis |
ECO:0000315 |
P |
Figure 5C shows mutant Shank3 mice had longer dendritic spine compared to control. Figure 5I and J showed spine density was reduced and length was increased in CA1 hippocampus in four week old mice. Similar result seen in week 10 mice (figure 5K and L) |
complete | |||||
GO:0097117 |
guanylate kinase-associated protein clustering |
ECO:0000315 |
P |
Figure 6A and C, A decrease of PSD proteins in postsynaptic density fraction. There was a decrease in GKAP protein. |
complete | |||||
GO:0097113 |
alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate receptor clustering |
ECO:0000315 |
P |
Figure 6B and D, A decrease of receptor subunit in synaptosome membrane fraction. There was a decrease in GluA1 subunit in mutant Shank3 mice compared to control. Similar results was seen in figure 6E, confirmed by quantitative analyses. |
complete | |||||
GO:0097114 |
N-methyl-D-aspartate receptor clustering |
ECO:0000315 |
P |
Figure 6B and D, A decrease of receptor subunit in synaptosome membrane fraction. There was a decrease in NR2A subunit in mutant Shank3 mice compared to control. |
complete | |||||
GO:0060291 |
long-term synaptic potentiation |
ECO:0000315 |
P |
Figure 7A, mutant Shank3 mice showed reduced hippocampal long term potentiation compared to control. |
complete | |||||
enables |
GO:0043621 |
protein self-association |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0061001 |
regulation of dendritic spine morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060291 |
long-term synaptic potentiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0097114 |
NMDA glutamate receptor clustering |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0097113 |
AMPA glutamate receptor clustering |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0097117 |
guanylate kinase-associated protein clustering |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060997 |
dendritic spine morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007613 |
memory |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035640 |
exploration behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000821 |
regulation of grooming behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007612 |
learning |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0040011 |
locomotion |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050885 |
neuromuscular process controlling balance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071625 |
vocalization behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035176 |
social behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0097113 |
AMPA glutamate receptor clustering |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060292 |
long-term synaptic depression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051968 |
positive regulation of synaptic transmission, glutamatergic |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000463 |
positive regulation of excitatory postsynaptic potential |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1900273 |
positive regulation of long-term synaptic potentiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000969 |
positive regulation of AMPA receptor activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000822 |
regulation of behavioral fear response |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000821 |
regulation of grooming behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000821 |
regulation of grooming behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000463 |
positive regulation of excitatory postsynaptic potential |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0002608) |
Seeded From UniProt |
complete | ||
involved_in |
GO:2000463 |
positive regulation of excitatory postsynaptic potential |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000463 |
positive regulation of excitatory postsynaptic potential |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1900452 |
regulation of long-term synaptic depression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0002608) |
Seeded From UniProt |
complete | ||
involved_in |
GO:1900451 |
positive regulation of glutamate receptor signaling pathway |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0002608) |
Seeded From UniProt |
complete | ||
involved_in |
GO:1900271 |
regulation of long-term synaptic potentiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0097117 |
guanylate kinase-associated protein clustering |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0097114 |
NMDA glutamate receptor clustering |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0097113 |
AMPA glutamate receptor clustering |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0097113 |
AMPA glutamate receptor clustering |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0002608) |
Seeded From UniProt |
complete | ||
enables |
GO:0097110 |
scaffold protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0097107 |
postsynaptic density assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071625 |
vocalization behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071625 |
vocalization behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0061001 |
regulation of dendritic spine morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0002608) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060999 |
positive regulation of dendritic spine development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0002608) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060997 |
dendritic spine morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060997 |
dendritic spine morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060997 |
dendritic spine morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0060170 |
ciliary membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0060076 |
excitatory synapse |
ECO:0000305 |
curator inference used in manual assertion |
GO:0051968 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051968 |
positive regulation of synaptic transmission, glutamatergic |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0002608) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051968 |
positive regulation of synaptic transmission, glutamatergic |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051968 |
positive regulation of synaptic transmission, glutamatergic |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051835 |
positive regulation of synapse structural plasticity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050885 |
neuromuscular process controlling balance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048854 |
brain morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048170 |
positive regulation of long-term neuronal synaptic plasticity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045794 |
negative regulation of cell volume |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0044309 |
neuron spine |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043005 |
neuron projection |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0002608) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035641 |
locomotory exploration behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035641 |
locomotory exploration behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0035255 |
ionotropic glutamate receptor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0035255 |
ionotropic glutamate receptor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035176 |
social behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035176 |
social behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035176 |
social behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0030160 |
GKAP/Homer scaffold activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0021773 |
striatal medium spiny neuron differentiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0017124 |
SH3 domain binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008270 |
zinc ion binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008022 |
protein C-terminus binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007613 |
memory |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007612 |
learning |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007416 |
synapse assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0031234 |
extrinsic component of cytoplasmic side of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0006042 |
cell fractionation evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0005589 |
confocal microscopy evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0001225 |
knockout evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0000279 |
western blot evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
enables |
GO:0098919 |
structural constituent of postsynaptic density |
ECO:0006042 |
cell fractionation evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
enables |
GO:0098919 |
structural constituent of postsynaptic density |
ECO:0005589 |
confocal microscopy evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
enables |
GO:0098919 |
structural constituent of postsynaptic density |
ECO:0001225 |
knockout evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
enables |
GO:0098919 |
structural constituent of postsynaptic density |
ECO:0000279 |
western blot evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:2000463 |
positive regulation of excitatory postsynaptic potential |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:2000311 |
regulation of AMPA receptor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:3613677 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0097107 |
postsynaptic density assembly |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060999 |
positive regulation of dendritic spine development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060997 |
dendritic spine morphogenesis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060291 |
long-term synaptic potentiation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051968 |
positive regulation of synaptic transmission, glutamatergic |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051124 |
synaptic growth at neuromuscular junction |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0040752 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048854 |
brain morphogenesis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
colocalizes_with |
GO:0045211 |
postsynaptic membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:2671987 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0044309 |
neuron spine |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:2671987 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043005 |
neuron projection |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0035255 |
ionotropic glutamate receptor binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0030425 |
dendrite |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:3613677 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0030160 |
GKAP/Homer scaffold activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:3613677 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0030159 |
receptor signaling complex adaptor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001191878 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0040752 |
C |
Seeded From UniProt |
complete | ||
colocalizes_with |
GO:0008328 |
ionotropic glutamate receptor complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:2671987 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007416 |
synapse assembly |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:1904717 |
regulation of AMPA glutamate receptor clustering |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:5056336 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:1900451 |
positive regulation of glutamate receptor signaling pathway |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0099092 |
postsynaptic density, intracellular component |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0098919 |
structural constituent of postsynaptic density |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0097110 |
scaffold protein binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0071625 |
vocalization behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:5056336 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0071625 |
vocalization behavior |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0060997 |
dendritic spine morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:5056336 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0060170 |
ciliary membrane |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
C |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0051259 |
protein complex oligomerization |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0050807 |
regulation of synapse organization |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0048167 |
regulation of synaptic plasticity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:5056336 |
P |
|
Seeded From UniProt |
complete | |
part_of |
GO:0045202 |
synapse |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0043621 |
protein self-association |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0042802 |
identical protein binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0042297 |
vocal learning |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0035176 |
social behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:5056336 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0035176 |
social behavior |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0032232 |
negative regulation of actin filament bundle assembly |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0030534 |
adult behavior |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0030160 |
GKAP/Homer scaffold activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0017124 |
SH3 domain binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0008270 |
zinc ion binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0008022 |
protein C-terminus binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:69264 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007626 |
locomotory behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:5056336 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007612 |
learning |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0007611 |
learning or memory |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:5056336 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0001838 |
embryonic epithelial tube formation |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:97902 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0000165 |
MAPK cascade |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:95805 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0099562 |
maintenance of postsynaptic density structure |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0098919 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0099562 |
maintenance of postsynaptic density structure |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0098919 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0099562 |
maintenance of postsynaptic density structure |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0098919 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0099562 |
maintenance of postsynaptic density structure |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0098919 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0099562 |
maintenance of postsynaptic density structure |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0098919 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0043005 |
neuron projection |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0045211 |
postsynaptic membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0042995 |
cell projection |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030054 |
cell junction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003779 |
actin binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0045202 |
synapse |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0120038 |
plasma membrane bounded cell projection part |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0017146 |
NMDA selective glutamate receptor complex |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 1.13 1.14 1.15 1.16 1.17 1.18 1.19 1.20 Verpelli, C et al. (2011) Importance of Shank3 protein in regulating metabotropic glutamate receptor 5 (mGluR5) expression and signaling at synapses. J. Biol. Chem. 286 34839-50 PubMed GONUTS page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 2.18 2.19 2.20 2.21 2.22 2.23 2.24 2.25 2.26 2.27 2.28 2.29 2.30 2.31 2.32 2.33 2.34 2.35 2.36 2.37 2.38 2.39 2.40 2.41 2.42 2.43 2.44 Wang, X et al. (2011) Synaptic dysfunction and abnormal behaviors in mice lacking major isoforms of Shank3. Hum. Mol. Genet. 20 3093-108 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 Bozdagi, O et al. (2010) Haploinsufficiency of the autism-associated Shank3 gene leads to deficits in synaptic function, social interaction, and social communication. Mol Autism 1 15 PubMed GONUTS page
- ↑ 4.00 4.01 4.02 4.03 4.04 4.05 4.06 4.07 4.08 4.09 4.10 4.11 4.12 4.13 Peça, J et al. (2011) Shank3 mutant mice display autistic-like behaviours and striatal dysfunction. Nature 472 437-42 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 5.4 Uchino, S et al. (2006) Direct interaction of post-synaptic density-95/Dlg/ZO-1 domain-containing synaptic molecule Shank3 with GluR1 alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionic acid receptor. J. Neurochem. 97 1203-14 PubMed GONUTS page
- ↑ Uemura, T et al. (2004) Direct interaction of GluRdelta2 with Shank scaffold proteins in cerebellar Purkinje cells. Mol. Cell. Neurosci. 26 330-41 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.7 Wang, X et al. (2016) Altered mGluR5-Homer scaffolds and corticostriatal connectivity in a Shank3 complete knockout model of autism. Nat Commun 7 11459 PubMed GONUTS page
- ↑ 8.00 8.01 8.02 8.03 8.04 8.05 8.06 8.07 8.08 8.09 8.10 8.11 8.12 8.13 8.14 8.15 8.16 8.17 8.18 8.19 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Sawallisch, C et al. (2009) The insulin receptor substrate of 53 kDa (IRSp53) limits hippocampal synaptic plasticity. J. Biol. Chem. 284 9225-36 PubMed GONUTS page
- ↑ 10.0 10.1 Schuetz, G et al. (2004) The neuronal scaffold protein Shank3 mediates signaling and biological function of the receptor tyrosine kinase Ret in epithelial cells. J. Cell Biol. 167 945-52 PubMed GONUTS page
- ↑ 11.0 11.1 11.2 Berg, JM et al. (2015) JAKMIP1, a Novel Regulator of Neuronal Translation, Modulates Synaptic Function and Autistic-like Behaviors in Mouse. Neuron 88 1173-1191 PubMed GONUTS page
a
c
e
g
i
l
m
n
- GO:0032232 ! negative regulation of actin filament bundle assembly
- GO:0045794 ! negative regulation of cell volume
- GO:0050885 ! neuromuscular process controlling balance
- GO:0043005 ! neuron projection
- GO:0044309 ! neuron spine
- GO:0097114 ! NMDA glutamate receptor clustering
- GO:0017146 ! NMDA selective glutamate receptor complex
o
p
- GO:0005886 ! plasma membrane
- GO:0060999 ! positive regulation of dendritic spine development
- GO:2000463 ! positive regulation of excitatory postsynaptic potential
- GO:1900451 ! positive regulation of glutamate receptor signaling pathway
- GO:0051835 ! positive regulation of synapse structural plasticity
- GO:0048170 ! positive regulation of long-term neuronal synaptic plasticity
- GO:2000969 ! positive regulation of AMPA receptor activity
- GO:0051968 ! positive regulation of synaptic transmission, glutamatergic
- GO:1900273 ! positive regulation of long-term synaptic potentiation
- GO:0032793 ! positive regulation of CREB transcription factor activity
- GO:0043406 ! positive regulation of MAP kinase activity
- GO:0099092 ! postsynaptic density, intracellular component
- GO:0014069 ! postsynaptic density
- GO:0097107 ! postsynaptic density assembly
- GO:0045211 ! postsynaptic membrane
- GO:0051259 ! protein complex oligomerization
r
- GO:2000822 ! regulation of behavioral fear response
- GO:1900452 ! regulation of long-term synaptic depression
- GO:1900271 ! regulation of long-term synaptic potentiation
- GO:1904717 ! regulation of AMPA glutamate receptor clustering
- GO:0050807 ! regulation of synapse organization
- GO:0048167 ! regulation of synaptic plasticity
- GO:2000821 ! regulation of grooming behavior
- GO:0061001 ! regulation of dendritic spine morphogenesis
- GO:2000311 ! regulation of AMPA receptor activity
- Rodentia
s
- GO:0097110 ! scaffold protein binding
- GO:1990021 ! Schaffer axon collateral
- Sciurognathi
- GO:0017124 ! SH3 domain binding
- GO:0030159 ! signaling receptor complex adaptor activity
- GO:0035176 ! social behavior
- GO:0021773 ! striatal medium spiny neuron differentiation
- GO:0098919 ! structural constituent of postsynaptic density
- GO:0045202 ! synapse
- GO:0007416 ! synapse assembly
- GO:0051124 ! synaptic assembly at neuromuscular junction
- GO:0030160 ! synaptic receptor adaptor activity