GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
MOUSE:SHAN2
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Shank2 (synonyms: Cortbp1, Kiaa1022) | |
Protein Name(s) | SH3 and multiple ankyrin repeat domains protein 2
Shank2 Cortactin-binding protein 1 CortBP1 | |
External Links | ||
UniProt | Q80Z38 | |
EMBL | AB099695 AC124520 AC127546 AC140268 AC152166 BC167171 AK139360 AK220363 | |
CCDS | CCDS40201.1 | |
RefSeq | NP_001074839.2 NP_001106844.2 XP_006508596.1 | |
UniGene | Mm.483624 | |
ProteinModelPortal | Q80Z38 | |
SMR | Q80Z38 | |
BioGrid | 229144 | |
IntAct | Q80Z38 | |
PhosphoSite | Q80Z38 | |
MaxQB | Q80Z38 | |
PaxDb | Q80Z38 | |
PRIDE | Q80Z38 | |
DNASU | 210274 | |
Ensembl | ENSMUST00000097929 | |
GeneID | 210274 | |
KEGG | mmu:210274 | |
UCSC | uc009kqe.2 uc009kqf.1 uc009kqg.1 | |
CTD | 22941 | |
MGI | MGI:2671987 | |
eggNOG | COG0666 | |
GeneTree | ENSGT00510000046474 | |
HOGENOM | HOG000293276 | |
HOVERGEN | HBG054027 | |
InParanoid | Q80Z38 | |
KO | K15009 | |
NextBio | 372912 | |
PRO | PR:Q80Z38 | |
Proteomes | UP000000589 | |
Bgee | Q80Z38 | |
CleanEx | MM_SHANK2 | |
ExpressionAtlas | Q80Z38 | |
Genevestigator | Q80Z38 | |
GO | GO:0016324 GO:0031526 GO:0030054 GO:0060170 GO:0005737 GO:0043197 GO:0030426 GO:0043005 GO:0043025 GO:0001917 GO:0001750 GO:0005886 GO:0014069 GO:0045211 GO:0035255 GO:0030534 GO:0035640 GO:0007612 GO:0060292 GO:0060291 GO:0007613 GO:0035176 GO:0007416 GO:0071625 | |
Gene3D | 1.10.150.50 2.30.42.10 | |
InterPro | IPR001478 IPR001660 IPR013761 IPR021129 IPR011511 IPR001452 | |
Pfam | PF00595 PF00536 PF07653 | |
SMART | SM00228 SM00454 SM00326 | |
SUPFAM | SSF47769 SSF50044 SSF50156 | |
PROSITE | PS50106 PS50105 PS50002 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0001750 |
photoreceptor outer segment |
ECO:0000314 |
C |
Shank 2 expression in developing mouse retina figure 1. |
complete | |||||
GO:0001917 |
photoreceptor inner segment |
ECO:0000314 |
C |
Shank 2 expression in developing mouse retina figure 1. |
complete | |||||
GO:0005883 |
neurofilament |
ECO:0000314 |
C |
Shank2 is colocalized with neurofilament which is a neuronal differentiation marker during developing mouse retinal, figure 2. |
complete | |||||
GO:0005886 |
plasma membrane |
ECO:0000314 |
C |
COS7 cells expressed with Glur1, shank 2 localized to membrane figure 1B. |
complete | |||||
GO:0051968 |
positive regulation of synaptic transmission, glutamatergic |
ECO:0000315 |
P |
Figure 2 shows that in Shank2 lacking mutant mice there was reduced synaptic transmission compared to the wild type mice suggesting that Shank2 is a positive regulator of the hippocampal glutamatergic synaptic transmission. |
complete | |||||
GO:0043197 |
dendritic spine |
ECO:0000314 |
C |
Figure 3B and C, immunohistochemical analysis showed Shank2 protein staining on dendritic spines of Purkinje cells |
complete | |||||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005883 |
neurofilament |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0001917 |
photoreceptor inner segment |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0001750 |
photoreceptor outer segment |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051968 |
positive regulation of synaptic transmission, glutamatergic |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071625 |
vocalization behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060292 |
long-term synaptic depression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(UBERON:0003881) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060291 |
long-term synaptic potentiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(UBERON:0003881) |
Seeded From UniProt |
complete | ||
part_of |
GO:0060170 |
ciliary membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0045211 |
postsynaptic membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043025 |
neuronal cell body |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043005 |
neuron projection |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0002608) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035640 |
exploration behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0035255 |
ionotropic glutamate receptor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0035255 |
ionotropic glutamate receptor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035176 |
social behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0031526 |
brush border membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030534 |
adult behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0030426 |
growth cone |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016324 |
apical plasma membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0008328 |
ionotropic glutamate receptor complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007613 |
memory |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007612 |
learning |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007416 |
synapse assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(UBERON:0003881) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0005883 |
neurofilament |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0001917 |
photoreceptor inner segment |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0001750 |
photoreceptor outer segment |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0099562 |
maintenance of postsynaptic density structure |
ECO:0006042 |
cell fractionation evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0099562 |
maintenance of postsynaptic density structure |
ECO:0001225 |
knockout evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0099562 |
maintenance of postsynaptic density structure |
ECO:0000279 |
western blot evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000463 |
positive regulation of excitatory postsynaptic potential |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:2000311 |
regulation of AMPA receptor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:3613677 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0097107 |
postsynaptic density assembly |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060999 |
positive regulation of dendritic spine development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060997 |
dendritic spine morphogenesis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060291 |
long-term synaptic potentiation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051968 |
positive regulation of synaptic transmission, glutamatergic |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051124 |
synaptic growth at neuromuscular junction |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0040752 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048854 |
brain morphogenesis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
colocalizes_with |
GO:0045211 |
postsynaptic membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:2671987 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0044309 |
neuron spine |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:2671987 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043005 |
neuron projection |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0035255 |
ionotropic glutamate receptor binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0030425 |
dendrite |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:3613677 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0030160 |
GKAP/Homer scaffold activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:3613677 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0030159 |
receptor signaling complex adaptor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001191878 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0040752 |
C |
Seeded From UniProt |
complete | ||
colocalizes_with |
GO:0008328 |
ionotropic glutamate receptor complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:2671987 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007416 |
synapse assembly |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628772 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0098919 |
structural constituent of postsynaptic density |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628772 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0098686 |
hippocampal mossy fiber to CA3 synapse |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628772 |
C |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0071625 |
vocalization behavior |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0060170 |
ciliary membrane |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628772 |
C |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0050807 |
regulation of synapse organization |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628772 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0048786 |
presynaptic active zone |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043025 |
neuronal cell body |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628772 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043005 |
neuron projection |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0035176 |
social behavior |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0032279 |
asymmetric synapse |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628772 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0031526 |
brush border membrane |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628772 |
C |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0030534 |
adult behavior |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0030426 |
growth cone |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628772 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0017124 |
SH3 domain binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628772 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0016324 |
apical plasma membrane |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628772 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628772 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0008022 |
protein C-terminus binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628772 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007612 |
learning |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0120038 |
plasma membrane bounded cell projection part |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0017146 |
NMDA selective glutamate receptor complex |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0042995 |
cell projection |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0017124 |
SH3 domain binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0045211 |
postsynaptic membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030054 |
cell junction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0045202 |
synapse |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016324 |
apical plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030426 |
growth cone |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Kim, JH et al. (2009) Shank 2 expression coincides with neuronal differentiation in the developing retina. Exp. Mol. Med. 41 236-42 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 Uemura, T et al. (2004) Direct interaction of GluRdelta2 with Shank scaffold proteins in cerebellar Purkinje cells. Mol. Cell. Neurosci. 26 330-41 PubMed GONUTS page
- ↑ 3.0 3.1 Schmeisser, MJ et al. (2012) Autistic-like behaviours and hyperactivity in mice lacking ProSAP1/Shank2. Nature 486 256-60 PubMed GONUTS page
- ↑ 4.00 4.01 4.02 4.03 4.04 4.05 4.06 4.07 4.08 4.09 4.10 4.11 Won, H et al. (2012) Autistic-like social behaviour in Shank2-mutant mice improved by restoring NMDA receptor function. Nature 486 261-5 PubMed GONUTS page
- ↑ Verpelli, C et al. (2011) Importance of Shank3 protein in regulating metabotropic glutamate receptor 5 (mGluR5) expression and signaling at synapses. J. Biol. Chem. 286 34839-50 PubMed GONUTS page
- ↑ Uchino, S et al. (2006) Direct interaction of post-synaptic density-95/Dlg/ZO-1 domain-containing synaptic molecule Shank3 with GluR1 alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionic acid receptor. J. Neurochem. 97 1203-14 PubMed GONUTS page
- ↑ 7.00 7.01 7.02 7.03 7.04 7.05 7.06 7.07 7.08 7.09 7.10 7.11 7.12 7.13 7.14 7.15 7.16 7.17 7.18 7.19 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Yang, J et al. (2011) DGKι regulates presynaptic release during mGluR-dependent LTD. EMBO J. 30 165-80 PubMed GONUTS page
- ↑ 9.0 9.1 9.2 Berg, JM et al. (2015) JAKMIP1, a Novel Regulator of Neuronal Translation, Modulates Synaptic Function and Autistic-like Behaviors in Mouse. Neuron 88 1173-1191 PubMed GONUTS page
c
i
l
m
n
o
p
- GO:0001917 ! photoreceptor inner segment
- GO:0001750 ! photoreceptor outer segment
- GO:0005886 ! plasma membrane
- GO:0051968 ! positive regulation of synaptic transmission, glutamatergic
- GO:0060999 ! positive regulation of dendritic spine development
- GO:2000463 ! positive regulation of excitatory postsynaptic potential
- GO:0014069 ! postsynaptic density
- GO:0045211 ! postsynaptic membrane
- GO:0097107 ! postsynaptic density assembly
- GO:0048786 ! presynaptic active zone
r
s
- Sciurognathi
- GO:0017124 ! SH3 domain binding
- GO:0030159 ! signaling receptor complex adaptor activity
- GO:0035176 ! social behavior
- GO:0098919 ! structural constituent of postsynaptic density
- GO:0045202 ! synapse
- GO:0007416 ! synapse assembly
- GO:0051124 ! synaptic assembly at neuromuscular junction
- GO:0030160 ! synaptic receptor adaptor activity