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MOUSE:RL7A
Contents
| Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
| Gene Name(s) | Rpl7a (synonyms: Surf-3, Surf3) | |
| Protein Name(s) | 60S ribosomal protein L7a
Surfeit locus protein 3 | |
| External Links | ||
| UniProt | P12970 | |
| EMBL | M14689 M21455 M21456 M21457 M21458 M21459 M21460 M14692 AK019449 BC016489 BC080663 BC080669 BC080712 BC084678 | |
| CCDS | CCDS15815.1 | |
| PIR | A30241 | |
| RefSeq | NP_038749.1 | |
| UniGene | Mm.328601 Mm.398371 | |
| ProteinModelPortal | P12970 | |
| SMR | P12970 | |
| BioGrid | 205125 | |
| IntAct | P12970 | |
| MINT | MINT-4132646 | |
| STRING | 10090.ENSMUSP00000135914 | |
| iPTMnet | P12970 | |
| PhosphoSite | P12970 | |
| SwissPalm | P12970 | |
| EPD | P12970 | |
| PaxDb | P12970 | |
| PRIDE | P12970 | |
| Ensembl | ENSMUST00000102898 | |
| GeneID | 27176 | |
| KEGG | mmu:27176 | |
| UCSC | uc008iwf.1 | |
| CTD | 6130 | |
| MGI | MGI:1353472 | |
| eggNOG | KOG3166 COG1358 | |
| HOVERGEN | HBG002936 | |
| InParanoid | P12970 | |
| KO | K02936 | |
| OMA | TCTCVAF | |
| OrthoDB | EOG712TXC | |
| PhylomeDB | P12970 | |
| TreeFam | TF300788 | |
| Reactome | R-MMU-156827 R-MMU-1799339 R-MMU-72689 R-MMU-72706 R-MMU-975956 R-MMU-975957 | |
| NextBio | 305063 | |
| PRO | PR:P12970 | |
| Proteomes | UP000000589 | |
| Bgee | P12970 | |
| CleanEx | MM_RPL7A | |
| ExpressionAtlas | P12970 | |
| Genevisible | P12970 | |
| GO | GO:0005737 GO:0022625 GO:0070062 GO:0005925 GO:0016020 GO:0005730 GO:0005634 GO:0042788 GO:0044822 GO:0042254 | |
| Gene3D | 3.30.1330.30 | |
| InterPro | IPR029064 IPR001921 IPR004038 IPR018492 IPR004037 | |
| Pfam | PF01248 | |
| PRINTS | PR00881 PR00882 | |
| SUPFAM | SSF55315 | |
| PROSITE | PS01082 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0016020 |
membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0042788 |
polysomal ribosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
| GO:0005730 |
nucleolus |
ECO:0000314 |
C |
Figure 4(C1) shows accumulation of GFP-RPL7a in nucleolus of control cells. |
complete | |||||
|
part_of |
GO:0045202 |
synapse |
ECO:0006042 |
cell fractionation evidence used in manual assertion |
C |
part_of:(UBERON:0000955) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0045202 |
synapse |
ECO:0001230 |
mass spectrometry evidence used in manual assertion |
C |
part_of:(UBERON:0000955) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0022625 |
cytosolic large ribosomal subunit |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10864 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000559990 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000470 |
maturation of LSU-rRNA |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000559990 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0042788 |
polysomal ribosome |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0022625 |
cytosolic large ribosomal subunit |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:1307586 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0016020 |
membrane |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005840 |
ribosome |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:1307586 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0042254 |
ribosome biogenesis |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:1990904 |
ribonucleoprotein complex |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005840 |
ribosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Lalli, E et al. (2000) Orphan receptor DAX-1 is a shuttling RNA binding protein associated with polyribosomes via mRNA. Mol. Cell. Biol. 20 4910-21 PubMed GONUTS page
- ↑ Kazyken, D et al. (2014) The nuclear import of ribosomal proteins is regulated by mTOR. Oncotarget 5 9577-93 PubMed GONUTS page
- ↑ 3.0 3.1 Trinidad, JC et al. (2006) Comprehensive identification of phosphorylation sites in postsynaptic density preparations. Mol. Cell Proteomics 5 914-22 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
