GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

MOUSE:RHOC

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Rhoc (synonyms: Arhc)
Protein Name(s) Rho-related GTP-binding protein RhoC

Silica-induced gene 61 protein SIG-61

External Links
UniProt Q62159
EMBL X80638
AK011599
AK152802
AK160650
BC004627
CCDS CCDS17704.1
RefSeq NP_001278788.1
NP_031510.2
UniGene Mm.262
ProteinModelPortal Q62159
SMR Q62159
BioGrid 198197
IntAct Q62159
MINT MINT-4132345
PhosphoSite Q62159
MaxQB Q62159
PaxDb Q62159
PRIDE Q62159
Ensembl ENSMUST00000002303
ENSMUST00000106787
GeneID 11853
KEGG mmu:11853
UCSC uc008qul.2
CTD 389
MGI MGI:106028
eggNOG COG1100
GeneTree ENSGT00760000119020
HOGENOM HOG000233974
HOVERGEN HBG009351
InParanoid Q62159
KO K07857
OMA KKRKGCP
OrthoDB EOG73FQPD
PhylomeDB Q62159
TreeFam TF300837
Reactome REACT_204733
REACT_210090
REACT_246650
NextBio 279829
PRO PR:Q62159
Proteomes UP000000589
Bgee Q62159
CleanEx MM_RHOC
ExpressionAtlas Q62159
Genevestigator Q62159
GO GO:0032154
GO:0005829
GO:0070062
GO:0005634
GO:0005886
GO:0005525
GO:0004871
GO:0043297
GO:0000910
GO:0043123
GO:0007264
Gene3D 3.40.50.300
InterPro IPR027417
IPR005225
IPR001806
IPR003578
Pfam PF00071
PRINTS PR00449
SMART SM00174
SUPFAM SSF52540
TIGRFAMs TIGR00231
PROSITE PS51420

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0032420

stereocilium

PMID:27269051[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0032464

positive regulation of protein homooligomerization

PMID:27269051[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1902766

skeletal muscle satellite cell migration

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:F1CG58

P

Seeded From UniProt

complete

involved_in

GO:0044319

wound healing, spreading of cells

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:F1CG58

P

Seeded From UniProt

complete

involved_in

GO:1902766

skeletal muscle satellite cell migration

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:G1MTS2

P

Seeded From UniProt

complete

involved_in

GO:0044319

wound healing, spreading of cells

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:G1MTS2

P

Seeded From UniProt

complete

involved_in

GO:0043297

apical junction assembly

PMID:20974804[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0032154

cleavage furrow

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P08134

C

Seeded From UniProt

complete

involved_in

GO:0000281

mitotic cytokinesis

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P08134

P

Seeded From UniProt

complete

involved_in

GO:0051017

actin filament bundle assembly

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0014020
PANTHER:PTN000632672
UniProtKB:O00212

P

Seeded From UniProt

complete

part_of

GO:0043231

intracellular membrane-bounded organelle

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000632672
UniProtKB:Q92730

C

Seeded From UniProt

complete

involved_in

GO:0032956

regulation of actin cytoskeleton organization

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1096342
PANTHER:PTN000632672
PomBase:SPAC16A10.04
PomBase:SPAC1F7.04
UniProtKB:P61586
ZFIN:ZDB-GENE-040322-2

P

Seeded From UniProt

complete

part_of

GO:0032153

cell division site

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000632672
PomBase:SPAC16.01
PomBase:SPAC16A10.04
PomBase:SPAC20H4.11c
PomBase:SPAC23C4.08

C

Seeded From UniProt

complete

involved_in

GO:0030950

establishment or maintenance of actin cytoskeleton polarity

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0014020
PANTHER:PTN000632672
PomBase:SPAC16.01
PomBase:SPAC1F7.04
SGD:S000001380
UniProtKB:I3LVS7

P

Seeded From UniProt

complete

involved_in

GO:0030334

regulation of cell migration

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0014020
PANTHER:PTN000632672
UniProtKB:P61586
UniProtKB:P62745

P

Seeded From UniProt

complete

enables

GO:0019901

protein kinase binding

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:108446
PANTHER:PTN000632672
WB:WBGene00004357

F

Seeded From UniProt

complete

involved_in

GO:0016477

cell migration

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001178055
UniProtKB:P61586

P

Seeded From UniProt

complete

involved_in

GO:0008360

regulation of cell shape

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000632672
PomBase:SPAC16A10.04

P

Seeded From UniProt

complete

involved_in

GO:0007266

Rho protein signal transduction

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0010341
FB:FBgn0014011
MGI:MGI:1931551
PANTHER:PTN000632671
RGD:619921
UniProtKB:I3LVS7
UniProtKB:P61586
UniProtKB:P84095

P

Seeded From UniProt

complete

involved_in

GO:0007015

actin filament organization

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0014020
PANTHER:PTN000632672
UniProtKB:Q92730
UniProtKB:Q9HBH0

P

Seeded From UniProt

complete

part_of

GO:0005938

cell cortex

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0014020
PANTHER:PTN000632672
PomBase:SPAC16A10.04
UniProtKB:I3LVS7
UniProtKB:P61586
WB:WBGene00004357

C

Seeded From UniProt

complete

colocalizes_with

GO:0005886

plasma membrane

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

CGD:CAL0000192659
MGI:MGI:106028
MGI:MGI:107949
MGI:MGI:1096342
PANTHER:PTN000632672
PomBase:SPAC23C4.08
SGD:S000001763
UniProtKB:A0A1D8PH96
UniProtKB:P62745
UniProtKB:Q92730

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0014020
PANTHER:PTN000632672
RGD:619921

C

Seeded From UniProt

complete

enables

GO:0005525

GTP binding

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0039140
MGI:MGI:108446
MGI:MGI:97845
PANTHER:PTN000632671
RGD:619755
RGD:619921
RGD:71043
SGD:S000001380
TAIR:locus:2131606
TAIR:locus:2204380
UniProtKB:A0A1D8PDV5
UniProtKB:P15153
UniProtKB:P60953
UniProtKB:P61586
UniProtKB:P63000
UniProtKB:Q15669
UniProtKB:Q9SSX0
WB:WBGene00000390
WB:WBGene00000424
WB:WBGene00004287
WB:WBGene00004357

F

Seeded From UniProt

complete

enables

GO:0003924

GTPase activity

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0010333
FB:FBgn0010341
FB:FBgn0014011
FB:FBgn0014020
MGI:MGI:106211
MGI:MGI:1096342
MGI:MGI:1916831
MGI:MGI:97845
MGI:MGI:97846
PANTHER:PTN000632671
PomBase:SPAC110.03
PomBase:SPAC16.01
PomBase:SPAC16A10.04
PomBase:SPAC1F7.04
PomBase:SPAC23C4.08
RGD:619755
RGD:619921
SGD:S000000046
SGD:S000001380
SGD:S000001763
SGD:S000004219
SGD:S000005034
SGD:S000005124
SGD:S000006369
TAIR:locus:2099232
TAIR:locus:2131606
UniProtKB:A0A1D8PCX9
UniProtKB:A0A1D8PH96
UniProtKB:P17081
UniProtKB:P60763
UniProtKB:P60953
UniProtKB:P61586
UniProtKB:P63000
UniProtKB:P84095
UniProtKB:Q5A904
WB:WBGene00000390
WB:WBGene00000424
WB:WBGene00003239
WB:WBGene00004287
WB:WBGene00004357

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060193

positive regulation of lipase activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08134

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051496

positive regulation of stress fiber assembly

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08134

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0043297

apical junction assembly

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08134

P

Seeded From UniProt

complete

part_of

GO:0032154

cleavage furrow

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08134

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0030335

positive regulation of cell migration

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08134

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:1304965

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:15093731[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:1304965

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:15093731[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000281

mitotic cytokinesis

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08134

P

Seeded From UniProt

complete

involved_in

GO:0060193

positive regulation of lipase activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08134
ensembl:ENSP00000285735

P

Seeded From UniProt

complete

involved_in

GO:0051496

positive regulation of stress fiber assembly

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08134
ensembl:ENSP00000285735

P

Seeded From UniProt

complete

involved_in

GO:0043297

apical junction assembly

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08134
ensembl:ENSP00000285735

P

Seeded From UniProt

complete

part_of

GO:0032154

cleavage furrow

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08134
ensembl:ENSP00000285735

C

Seeded From UniProt

complete

involved_in

GO:0030335

positive regulation of cell migration

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08134
ensembl:ENSP00000285735

P

Seeded From UniProt

complete

involved_in

GO:0000281

mitotic cytokinesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08134
ensembl:ENSP00000285735

P

Seeded From UniProt

complete

enables

GO:0003924

GTPase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001806

F

Seeded From UniProt

complete

enables

GO:0005525

GTP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001806
InterPro:IPR003578
InterPro:IPR005225

F

Seeded From UniProt

complete

involved_in

GO:0007264

small GTPase mediated signal transduction

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003578

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

Reactome:R-MMU-8981447
Reactome:R-MMU-5666183
Reactome:R-MMU-5625893

ECO:0000304

author statement supported by traceable reference used in manual assertion



C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003
UniProtKB-SubCell:SL-0039

C

Seeded From UniProt

complete

enables

GO:0005525

GTP binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0342

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

part_of

GO:0032154

cleavage furrow

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0467

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Zhao, B et al. (2016) Murine Fam65b forms ring-like structures at the base of stereocilia critical for mechanosensory hair cell function. Elife 5 PubMed GONUTS page
  2. Wallace, SW et al. (2011) The Rho target PRK2 regulates apical junction formation in human bronchial epithelial cells. Mol. Cell. Biol. 31 81-91 PubMed GONUTS page
  3. 3.00 3.01 3.02 3.03 3.04 3.05 3.06 3.07 3.08 3.09 3.10 3.11 3.12 3.13 3.14 3.15 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  4. 4.0 4.1 Yonemura, S et al. (2004) Rho localization in cells and tissues. Exp. Cell Res. 295 300-14 PubMed GONUTS page