GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
MOUSE:MBD5
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Mbd5 | |
Protein Name(s) | Methyl-CpG-binding domain protein 5
Methyl-CpG-binding protein MBD5 | |
External Links | ||
UniProt | B1AYB6 | |
EMBL | BX546465 AL845298 AL845298 BX546465 BC138375 BC138378 | |
CCDS | CCDS71051.1 | |
RefSeq | NP_001277585.1 | |
UniGene | Mm.440436 | |
ProteinModelPortal | B1AYB6 | |
SMR | B1AYB6 | |
PRIDE | B1AYB6 | |
Ensembl | ENSMUST00000112754 | |
GeneID | 109241 | |
KEGG | mmu:109241 | |
UCSC | uc012bve.1 | |
CTD | 55777 | |
MGI | MGI:2138934 | |
eggNOG | NOG27778 | |
GeneTree | ENSGT00530000064137 | |
HOGENOM | HOG000049255 | |
HOVERGEN | HBG052419 | |
InParanoid | B1AYB6 | |
ChiTaRS | Mbd5 | |
PRO | PR:B1AYB6 | |
Proteomes | UP000000589 | |
Bgee | B1AYB6 | |
ExpressionAtlas | B1AYB6 | |
Genevestigator | B1AYB6 | |
GO | GO:0005694 GO:0005634 GO:0003682 GO:0042593 GO:0060399 GO:0040014 | |
InterPro | IPR001739 | |
PROSITE | PS50982 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0045899 |
positive regulation of RNA polymerase II transcriptional preinitiation complex assembly |
ECO:0000314 |
P |
Figure 2 shows that 'The Mbd5-knockout mice had significantly smaller body size than their littermates, and the reduction in body weight was accompanied by a reduction in body length.' |
complete | |||||
enables |
GO:0003682 |
chromatin binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
NOT|enables |
GO:0003677 |
DNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0010369 |
chromocenter |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001441501 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001441501 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003682 |
chromatin binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001441501 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0060399 |
positive regulation of growth hormone receptor signaling pathway |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:5466580 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0050795 |
regulation of behavior |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0042593 |
glucose homeostasis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:5466580 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0040014 |
regulation of multicellular organism growth |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:5466580 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0030496 |
midbody |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0010369 |
chromocenter |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0007399 |
nervous system development |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003682 |
chromatin binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005694 |
chromosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Du, Y et al. (2012) The essential role of Mbd5 in the regulation of somatic growth and glucose homeostasis in mice. PLoS ONE 7 e47358 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
c
p
r