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MOUSE:HTSF1
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Htatsf1 | |
Protein Name(s) | HIV Tat-specific factor 1 homolog | |
External Links | ||
UniProt | Q8BGC0 | |
EMBL | AK005527 AK011234 AK049495 AL672263 BC037711 BC114588 BC114589 | |
CCDS | CCDS40983.1 | |
RefSeq | NP_082518.1 NP_083647.1 | |
UniGene | Mm.2152 | |
ProteinModelPortal | Q8BGC0 | |
SMR | Q8BGC0 | |
DIP | DIP-46367N | |
IntAct | Q8BGC0 | |
MINT | MINT-4110261 | |
PhosphoSite | Q8BGC0 | |
MaxQB | Q8BGC0 | |
PaxDb | Q8BGC0 | |
PRIDE | Q8BGC0 | |
Ensembl | ENSMUST00000088652 ENSMUST00000114751 | |
GeneID | 72459 | |
KEGG | mmu:72459 | |
UCSC | uc009tgv.2 uc009tgw.2 | |
CTD | 27336 | |
MGI | MGI:1919709 | |
eggNOG | NOG317500 | |
GeneTree | ENSGT00390000009902 | |
HOGENOM | HOG000049201 | |
HOVERGEN | HBG059454 | |
InParanoid | Q8BGC0 | |
KO | K13093 | |
OMA | QITAEAW | |
OrthoDB | EOG7VHSZQ | |
PhylomeDB | Q8BGC0 | |
TreeFam | TF313623 | |
ChiTaRS | Htatsf1 | |
NextBio | 336274 | |
PRO | PR:Q8BGC0 | |
Proteomes | UP000000589 | |
Bgee | Q8BGC0 | |
CleanEx | MM_HTATSF1 | |
Genevestigator | Q8BGC0 | |
GO | GO:0005634 GO:0000166 GO:0044822 GO:0006355 GO:0006351 | |
Gene3D | 3.30.70.330 | |
InterPro | IPR012677 IPR000504 | |
Pfam | PF00076 | |
SMART | SM00360 | |
PROSITE | PS50102 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0005686 |
U2 snRNP |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000401295 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005684 |
U2-type spliceosomal complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000401295 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O43719 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000398 |
mRNA splicing, via spliceosome |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page