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MOUSE:HTSF1

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Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Htatsf1
Protein Name(s) HIV Tat-specific factor 1 homolog
External Links
UniProt Q8BGC0
EMBL AK005527
AK011234
AK049495
AL672263
BC037711
BC114588
BC114589
CCDS CCDS40983.1
RefSeq NP_082518.1
NP_083647.1
UniGene Mm.2152
ProteinModelPortal Q8BGC0
SMR Q8BGC0
DIP DIP-46367N
IntAct Q8BGC0
MINT MINT-4110261
PhosphoSite Q8BGC0
MaxQB Q8BGC0
PaxDb Q8BGC0
PRIDE Q8BGC0
Ensembl ENSMUST00000088652
ENSMUST00000114751
GeneID 72459
KEGG mmu:72459
UCSC uc009tgv.2
uc009tgw.2
CTD 27336
MGI MGI:1919709
eggNOG NOG317500
GeneTree ENSGT00390000009902
HOGENOM HOG000049201
HOVERGEN HBG059454
InParanoid Q8BGC0
KO K13093
OMA QITAEAW
OrthoDB EOG7VHSZQ
PhylomeDB Q8BGC0
TreeFam TF313623
ChiTaRS Htatsf1
NextBio 336274
PRO PR:Q8BGC0
Proteomes UP000000589
Bgee Q8BGC0
CleanEx MM_HTATSF1
Genevestigator Q8BGC0
GO GO:0005634
GO:0000166
GO:0044822
GO:0006355
GO:0006351
Gene3D 3.30.70.330
InterPro IPR012677
IPR000504
Pfam PF00076
SMART SM00360
PROSITE PS50102

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005686

U2 snRNP

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000401295
PomBase:SPBC1289.02c
SGD:S000005230

C

Seeded From UniProt

complete

part_of

GO:0005684

U2-type spliceosomal complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000401295
PomBase:SPBC1289.02c

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O43719

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O43719
ensembl:ENSP00000442699

C

Seeded From UniProt

complete

involved_in

GO:0000398

mRNA splicing, via spliceosome

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR034392

P

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000504
InterPro:IPR003954
InterPro:IPR035979

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page