GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
MOUSE:FBLN5
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Fbln5 (synonyms: Dance) | |
Protein Name(s) | Fibulin-5
FIBL-5 Developmental arteries and neural crest EGF-like protein Dance | |
External Links | ||
UniProt | Q9WVH9 | |
EMBL | AF112151 AK085170 AK090129 AK159471 AK159960 AK165018 BC006636 | |
CCDS | CCDS36525.1 | |
RefSeq | NP_035942.1 | |
UniGene | Mm.288381 Mm.465863 | |
ProteinModelPortal | Q9WVH9 | |
SMR | Q9WVH9 | |
IntAct | Q9WVH9 | |
MINT | MINT-4094993 | |
STRING | 10090.ENSMUSP00000021603 | |
MaxQB | Q9WVH9 | |
PaxDb | Q9WVH9 | |
PRIDE | Q9WVH9 | |
Ensembl | ENSMUST00000021603 | |
GeneID | 23876 | |
KEGG | mmu:23876 | |
UCSC | uc007otp.2 | |
CTD | 10516 | |
MGI | MGI:1346091 | |
eggNOG | NOG309650 | |
GeneTree | ENSGT00760000118806 | |
HOGENOM | HOG000234337 | |
HOVERGEN | HBG051560 | |
InParanoid | Q9WVH9 | |
KO | K17340 | |
OMA | PRDIQLD | |
OrthoDB | EOG7W9RTF | |
PhylomeDB | Q9WVH9 | |
TreeFam | TF317514 | |
Reactome | REACT_332220 REACT_334317 | |
ChiTaRS | Fbln5 | |
NextBio | 303595 | |
PRO | PR:Q9WVH9 | |
Proteomes | UP000000589 | |
Bgee | Q9WVH9 | |
CleanEx | MM_FBLN5 | |
Genevisible | Q9WVH9 | |
GO | GO:0070062 GO:0031012 GO:0005576 GO:0005615 GO:0005578 GO:0005509 GO:0005178 GO:0008022 GO:0042803 GO:0007155 GO:0048251 GO:0030198 GO:0034394 GO:0001558 GO:2000121 GO:0046903 | |
InterPro | IPR026823 IPR000742 IPR001881 IPR013032 IPR000152 IPR018097 IPR009030 | |
Pfam | PF12662 PF07645 | |
SMART | SM00179 | |
SUPFAM | SSF57184 | |
PROSITE | PS00010 PS01186 PS50026 PS01187 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0098867 |
intramembranous bone growth |
ECO:0000315 |
P |
Figures 2 Figure 2 shows that there is specifically a defect in the premaxillary bone of Fibulin-5 knock out mice. (Uberon:0002244) |
complete | |||||
GO:0097096 |
facial suture morphogenesis |
ECO:0000315 |
P |
Figure 4 E-G shows that a significant reduction of Ki67 immunostaining-positive cells in the PMMS (premaxillo-maxillary sutures) in Fibulin-5 KO mice was observed at P6. |
complete | |||||
GO:0033690 |
positive regulation of osteoblast proliferation |
ECO:0000315 |
P |
Figure 4 A-G "...a significant reduction of Ki67-positive cells in KO mice was observed at P6 ( Fig. 4E–G). These data suggest that fibulin-5 deficiency has little effect on skeletogenic differentiation, but has significant impact on the proliferation of PMMS cells. Taken together, the premaxillary bone elongation defect seen in fibulin-5-null mice might be caused by the reduced cell proliferation in PMMS" |
complete | |||||
GO:0016525 |
negative regulation of angiogenesis |
ECO:0000315 |
P |
Figure 1 shows “in fbln5-/- mice, the vessel appeared to have an increased number of small, tortuous branches compared with fbln5+/- and wild-type mice. The overall length of the vessel measured between the start and end points, however, was unchanged (Figure 1e), suggesting that the increased number of vessels branching from the long thoracic artery of fbln5-/- mice was not a consequence of a longer vessel.” |
complete | |||||
GO:0000122 |
negative regulation of transcription from RNA polymerase II promoter |
ECO:0000315 |
P |
Figure 4e and Figure 5a |
complete | |||||
GO:0045944 |
positive regulation of transcription from RNA polymerase II promoter |
ECO:0000315 |
P |
Figure 5b: "ESE-1, was slightly downregulated in fbln5 -/- SMCs" Looking at the figure, mRNA expression is what is measured. |
complete | |||||
part_of |
GO:0062023 |
collagen-containing extracellular matrix |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0000006) |
Seeded From UniProt |
complete | ||
enables |
GO:0030023 |
extracellular matrix constituent conferring elasticity |
ECO:0007666 |
automatically integrated combinatorial computational and experimental evidence used in manual assertion |
F |
occurs_in:(UBERON:0000006) |
Seeded From UniProt |
complete | ||
part_of |
GO:0062023 |
collagen-containing extracellular matrix |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0002048)|part_of:(UBERON:0001155) |
Seeded From UniProt |
complete | ||
enables |
GO:0030023 |
extracellular matrix constituent conferring elasticity |
ECO:0007666 |
automatically integrated combinatorial computational and experimental evidence used in manual assertion |
F |
occurs_in:(UBERON:0002048)|occurs_in:(UBERON:0001155) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005615 |
extracellular space |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
produced_by:(CL:0002548) |
Seeded From UniProt |
complete | ||
enables |
GO:0005178 |
integrin binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048251 |
elastic fiber assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0042803 |
protein homodimerization activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048251 |
elastic fiber assembly |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000121 |
regulation of removal of superoxide radicals |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0071953 |
elastic fiber |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048251 |
elastic fiber assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034394 |
protein localization to cell surface |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0062023 |
collagen-containing extracellular matrix |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0062023 |
collagen-containing extracellular matrix |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0048251 |
elastic fiber assembly |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0046903 |
secretion |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0042803 |
protein homodimerization activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0030198 |
extracellular matrix organization |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008022 |
protein C-terminus binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005615 |
extracellular space |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2594 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0062023 |
collagen-containing extracellular matrix |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBX5 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048251 |
elastic fiber assembly |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBX5 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0046903 |
secretion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBX5 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0042803 |
protein homodimerization activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBX5 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0008022 |
protein C-terminus binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBX5 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005615 |
extracellular space |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9WVH8 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001558 |
regulation of cell growth |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9WVH8 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0005509 |
calcium ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005615 |
extracellular space |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048251 |
elastic fiber assembly |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005576 |
extracellular region |
Reactome:R-NUL-2426460 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007155 |
cell adhesion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Noda, K et al. (2015) Fibulin-5 deficiency causes developmental defect of premaxillary bone in mice. Biochem. Biophys. Res. Commun. 466 585-91 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Sullivan, KM et al. (2007) Fibulin-5 functions as an endogenous angiogenesis inhibitor. Lab. Invest. 87 818-27 PubMed GONUTS page
- ↑ 3.0 3.1 Naba, A et al. (2017) Quantitative proteomic profiling of the extracellular matrix of pancreatic islets during the angiogenic switch and insulinoma progression. Sci Rep 7 40495 PubMed GONUTS page
- ↑ 4.0 4.1 Naba, A et al. (2012) The matrisome: in silico definition and in vivo characterization by proteomics of normal and tumor extracellular matrices. Mol. Cell Proteomics 11 M111.014647 PubMed GONUTS page
- ↑ Abonnenc, M et al. (2013) Extracellular matrix secretion by cardiac fibroblasts: role of microRNA-29b and microRNA-30c. Circ. Res. 113 1138-47 PubMed GONUTS page
- ↑ 6.0 6.1 Nakamura, T et al. (2002) Fibulin-5/DANCE is essential for elastogenesis in vivo. Nature 415 171-5 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 Nguyen, AD et al. (2004) Fibulin-5 is a novel binding protein for extracellular superoxide dismutase. Circ. Res. 95 1067-74 PubMed GONUTS page
- ↑ 8.0 8.1 Yanagisawa, H et al. (2002) Fibulin-5 is an elastin-binding protein essential for elastic fibre development in vivo. Nature 415 168-71 PubMed GONUTS page
- ↑ Manabe, R et al. (2008) Transcriptome-based systematic identification of extracellular matrix proteins. Proc. Natl. Acad. Sci. U.S.A. 105 12849-54 PubMed GONUTS page
c
e
g
n
p
r