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MOUSE:CWC15
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Cwc15 (synonyms: Ed1) | |
Protein Name(s) | Spliceosome-associated protein CWC15 homolog
Embryonic development factor 1 mED1 | |
External Links | ||
UniProt | Q9JHS9 | |
EMBL | AJ250394 AY842452 AK002864 AK003202 AK003591 AK003834 AK145249 AK167776 AK168365 BC004726 | |
CCDS | CCDS22823.1 | |
RefSeq | NP_075642.1 XP_006510600.1 | |
UniGene | Mm.245938 | |
ProteinModelPortal | Q9JHS9 | |
IntAct | Q9JHS9 | |
MINT | MINT-4129699 | |
PhosphoSite | Q9JHS9 | |
MaxQB | Q9JHS9 | |
PaxDb | Q9JHS9 | |
PRIDE | Q9JHS9 | |
Ensembl | ENSMUST00000004200 | |
GeneID | 66070 | |
KEGG | mmu:66070 | |
UCSC | uc009oeo.1 | |
CTD | 51503 | |
MGI | MGI:1913320 | |
eggNOG | NOG326120 | |
GeneTree | ENSGT00390000012084 | |
HOGENOM | HOG000214250 | |
HOVERGEN | HBG107412 | |
InParanoid | Q9JHS9 | |
KO | K12863 | |
OMA | NCARSEP | |
OrthoDB | EOG7FFMTR | |
PhylomeDB | Q9JHS9 | |
TreeFam | TF321323 | |
NextBio | 320536 | |
PRO | PR:Q9JHS9 | |
Proteomes | UP000000589 | |
Bgee | Q9JHS9 | |
CleanEx | MM_CWC15 | |
Genevestigator | Q9JHS9 | |
GO | GO:0071013 GO:0005634 GO:0005681 GO:0003723 GO:0000398 | |
InterPro | IPR006973 | |
PANTHER | PTHR12718 | |
Pfam | PF04889 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0000398 |
mRNA splicing, via spliceosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0071007 |
U2-type catalytic step 2 spliceosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005681 |
spliceosomal complex |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000398 |
mRNA splicing, via spliceosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0071013 |
catalytic step 2 spliceosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000295764 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045292 |
mRNA cis splicing, via spliceosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000295764 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003723 |
RNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000295764 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0071013 |
catalytic step 2 spliceosome |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0071007 |
U2-type catalytic step 2 spliceosome |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016607 |
nuclear speck |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005739 |
mitochondrion |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005681 |
spliceosomal complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0000398 |
mRNA splicing, via spliceosome |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0071013 |
catalytic step 2 spliceosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9P013 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0071007 |
U2-type catalytic step 2 spliceosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9P013 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0016607 |
nuclear speck |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9P013 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005739 |
mitochondrion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9P013 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005681 |
spliceosomal complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9P013 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9P013 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000398 |
mRNA splicing, via spliceosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9P013 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000398 |
mRNA splicing, via spliceosome |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005681 |
spliceosomal complex |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005681 |
spliceosomal complex |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006397 |
mRNA processing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008380 |
RNA splicing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page