GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

MOUSE:CWC15

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Cwc15 (synonyms: Ed1)
Protein Name(s) Spliceosome-associated protein CWC15 homolog

Embryonic development factor 1 mED1

External Links
UniProt Q9JHS9
EMBL AJ250394
AY842452
AK002864
AK003202
AK003591
AK003834
AK145249
AK167776
AK168365
BC004726
CCDS CCDS22823.1
RefSeq NP_075642.1
XP_006510600.1
UniGene Mm.245938
ProteinModelPortal Q9JHS9
IntAct Q9JHS9
MINT MINT-4129699
PhosphoSite Q9JHS9
MaxQB Q9JHS9
PaxDb Q9JHS9
PRIDE Q9JHS9
Ensembl ENSMUST00000004200
GeneID 66070
KEGG mmu:66070
UCSC uc009oeo.1
CTD 51503
MGI MGI:1913320
eggNOG NOG326120
GeneTree ENSGT00390000012084
HOGENOM HOG000214250
HOVERGEN HBG107412
InParanoid Q9JHS9
KO K12863
OMA NCARSEP
OrthoDB EOG7FFMTR
PhylomeDB Q9JHS9
TreeFam TF321323
NextBio 320536
PRO PR:Q9JHS9
Proteomes UP000000589
Bgee Q9JHS9
CleanEx MM_CWC15
Genevestigator Q9JHS9
GO GO:0071013
GO:0005634
GO:0005681
GO:0003723
GO:0000398
InterPro IPR006973
PANTHER PTHR12718
Pfam PF04889

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0000398

mRNA splicing, via spliceosome

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9P013

P

Seeded From UniProt

complete

part_of

GO:0071007

U2-type catalytic step 2 spliceosome

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9P013

C

Seeded From UniProt

complete

part_of

GO:0005681

spliceosomal complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9P013

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9P013

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P78794

C

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P78794

F

Seeded From UniProt

complete

involved_in

GO:0000398

mRNA splicing, via spliceosome

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P78794

P

Seeded From UniProt

complete

part_of

GO:0071013

catalytic step 2 spliceosome

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000295764
UniProtKB:Q9P013

C

Seeded From UniProt

complete

involved_in

GO:0045292

mRNA cis splicing, via spliceosome

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000295764
PomBase:SPBC337.06c

P

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000295764
PomBase:SPBC337.06c

F

Seeded From UniProt

complete

part_of

GO:0071013

catalytic step 2 spliceosome

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9P013

C

Seeded From UniProt

complete

part_of

GO:0071007

U2-type catalytic step 2 spliceosome

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9P013

C

Seeded From UniProt

complete

part_of

GO:0016607

nuclear speck

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9P013

C

Seeded From UniProt

complete

part_of

GO:0005739

mitochondrion

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9P013

C

Seeded From UniProt

complete

part_of

GO:0005681

spliceosomal complex

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9P013

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9P013

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000398

mRNA splicing, via spliceosome

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9P013

P

Seeded From UniProt

complete

part_of

GO:0071013

catalytic step 2 spliceosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9P013
ensembl:ENSP00000475615

C

Seeded From UniProt

complete

part_of

GO:0071007

U2-type catalytic step 2 spliceosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9P013
ensembl:ENSP00000475615

C

Seeded From UniProt

complete

part_of

GO:0016607

nuclear speck

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9P013
ensembl:ENSP00000475615

C

Seeded From UniProt

complete

part_of

GO:0005739

mitochondrion

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9P013
ensembl:ENSP00000475615

C

Seeded From UniProt

complete

part_of

GO:0005681

spliceosomal complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9P013
ensembl:ENSP00000475615

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9P013
ensembl:ENSP00000475615

C

Seeded From UniProt

complete

involved_in

GO:0000398

mRNA splicing, via spliceosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9P013
ensembl:ENSP00000475615

P

Seeded From UniProt

complete

involved_in

GO:0000398

mRNA splicing, via spliceosome

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006973

P

Seeded From UniProt

complete

part_of

GO:0005681

spliceosomal complex

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006973

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0005681

spliceosomal complex

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0747

C

Seeded From UniProt

complete

involved_in

GO:0006397

mRNA processing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0507

P

Seeded From UniProt

complete

involved_in

GO:0008380

RNA splicing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0508

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page