GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
MOUSE:CSN6
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Cops6 (synonyms: Csn6) | |
Protein Name(s) | COP9 signalosome complex subunit 6
SGN6 Signalosome subunit 6 JAB1-containing signalosome subunit 6 | |
External Links | ||
UniProt | O88545 | |
EMBL | AF071315 BC004664 BC014286 | |
CCDS | CCDS19792.1 | |
RefSeq | NP_036132.1 | |
UniGene | Mm.3981 | |
ProteinModelPortal | O88545 | |
SMR | O88545 | |
BioGrid | 205044 | |
IntAct | O88545 | |
MINT | MINT-4092182 | |
STRING | 10090.ENSMUSP00000019638 | |
MEROPS | M67.972 | |
PhosphoSite | O88545 | |
MaxQB | O88545 | |
PaxDb | O88545 | |
PRIDE | O88545 | |
Ensembl | ENSMUST00000019638 | |
GeneID | 26893 | |
KEGG | mmu:26893 | |
UCSC | uc009aer.1 | |
CTD | 10980 | |
MGI | MGI:1349439 | |
eggNOG | COG1310 | |
HOGENOM | HOG000253002 | |
HOVERGEN | HBG107770 | |
InParanoid | O88545 | |
KO | K12179 | |
OMA | DFLGWYT | |
OrthoDB | EOG7WT41Q | |
PhylomeDB | O88545 | |
TreeFam | TF101148 | |
NextBio | 304723 | |
PRO | PR:O88545 | |
Proteomes | UP000000589 | |
Bgee | O88545 | |
ExpressionAtlas | O88545 | |
Genevestigator | O88545 | |
GO | GO:0008180 GO:0005737 GO:0070062 GO:0010388 | |
InterPro | IPR000555 IPR024969 | |
Pfam | PF01398 PF13012 | |
SMART | SM00232 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0008180 |
COP9 signalosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1349439 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0008180 |
COP9 signalosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0008180 |
COP9 signalosome |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0000338 |
protein deneddylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0008180 |
COP9 signalosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q7L5N1 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q7L5N1 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000338 |
protein deneddylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q7L5N1 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000338 |
protein deneddylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0008180 |
COP9 signalosome |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0008180 |
COP9 signalosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Wei, N et al. () The COP9 complex is conserved between plants and mammals and is related to the 26S proteasome regulatory complex. Curr. Biol. 8 919-22 PubMed GONUTS page