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MOUSE:CNOT4
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Cnot4 (synonyms: Not4) | |
Protein Name(s) | CCR4-NOT transcription complex subunit 4
CCR4-associated factor 4 E3 ubiquitin-protein ligase CNOT4 Potential transcriptional repressor NOT4Hp | |
External Links | ||
UniProt | Q8BT14 | |
EMBL | U71269 AK009234 AK028190 AK032248 BC058778 | |
CCDS | CCDS19999.1 | |
RefSeq | NP_001157883.1 NP_001157885.1 NP_058573.3 XP_006506442.1 | |
UniGene | Mm.214525 Mm.398182 | |
PDB | 2CPI | |
PDBsum | 2CPI | |
ProteinModelPortal | Q8BT14 | |
SMR | Q8BT14 | |
PhosphoSite | Q8BT14 | |
MaxQB | Q8BT14 | |
PaxDb | Q8BT14 | |
PRIDE | Q8BT14 | |
Ensembl | ENSMUST00000044163 ENSMUST00000114993 | |
GeneID | 53621 | |
KEGG | mmu:53621 | |
UCSC | uc009bid.2 uc009big.2 | |
CTD | 4850 | |
MGI | MGI:1859026 | |
eggNOG | COG5175 | |
GeneTree | ENSGT00390000000068 | |
HOGENOM | HOG000065696 | |
HOVERGEN | HBG051043 | |
InParanoid | Q8BT14 | |
KO | K10643 | |
OrthoDB | EOG790G0K | |
PhylomeDB | Q8BT14 | |
TreeFam | TF106134 | |
Reactome | REACT_244119 | |
UniPathway | UPA00143 | |
EvolutionaryTrace | Q8BT14 | |
NextBio | 310353 | |
PRO | PR:Q8BT14 | |
Proteomes | UP000000589 | |
Bgee | Q8BT14 | |
CleanEx | MM_CNOT4 | |
ExpressionAtlas | Q8BT14 | |
Genevestigator | Q8BT14 | |
GO | GO:0030014 GO:0005737 GO:0005634 GO:0016874 GO:0000166 GO:0044822 GO:0004842 GO:0008270 GO:0051865 GO:0006355 GO:0006351 | |
Gene3D | 3.30.40.10 3.30.70.330 | |
InterPro | IPR012677 IPR000504 IPR000571 IPR001841 IPR013083 | |
SMART | SM00184 SM00360 | |
PROSITE | PS50102 PS50103 PS50089 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0045652 |
regulation of megakaryocyte differentiation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006511 |
ubiquitin-dependent protein catabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051865 |
protein autoubiquitination |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0030014 |
CCR4-NOT complex |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0030014 |
CCR4-NOT complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000288208 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016567 |
protein ubiquitination |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000288208 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000288208 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0051865 |
protein autoubiquitination |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045652 |
regulation of megakaryocyte differentiation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0030014 |
CCR4-NOT complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006511 |
ubiquitin-dependent protein catabolic process |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0030014 |
CCR4-NOT complex |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016567 |
protein ubiquitination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00143 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page