MOUSE:CIR1A

Species (Taxon ID)	Mus musculus (Mouse). (10090)
Gene Name(s)	Cirh1a (synonyms: Kiaa1988, Tex292)
Protein Name(s)	Cirhin Testis-expressed gene 292 protein
External Links
UniProt	Q8R2N2
EMBL	AK173318 BC018262 BC027399 BC068113 X80433 X80434
CCDS	CCDS52664.1
PIR	S46930
RefSeq	NP_035704.2 XP_006530905.1
UniGene	Mm.10665
ProteinModelPortal	Q8R2N2
SMR	Q8R2N2
BioGrid	204134
IntAct	Q8R2N2
PhosphoSite	Q8R2N2
MaxQB	Q8R2N2
PaxDb	Q8R2N2
PRIDE	Q8R2N2
Ensembl	ENSMUST00000047629
GeneID	21771
KEGG	mmu:21771
UCSC	uc009ngr.2
CTD	84916
MGI	MGI:1096573
eggNOG	COG2319
GeneTree	ENSGT00390000008662
HOGENOM	HOG000095656
HOVERGEN	HBG050963
InParanoid	Q8R2N2
KO	K14548
OMA	REFTQFA
OrthoDB	EOG7BZVRQ
PhylomeDB	Q8R2N2
TreeFam	TF313159
ChiTaRS	Cirh1a
NextBio	301108
PRO	PR:Q8R2N2
Proteomes	UP000000589
Bgee	Q8R2N2
CleanEx	MM_CIRH1A
Genevestigator	Q8R2N2
GO	GO:0005730 GO:0034455 GO:0044822 GO:0030490 GO:0006355 GO:0006351
Gene3D	2.130.10.10
InterPro	IPR015943 IPR001680 IPR017986
Pfam	PF00400
SMART	SM00320
SUPFAM	SSF50978
PROSITE	PS50294

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
	GO:0005730	nucleolus	PMID:16225863	ECO:0000314			C		Figure 2D.	complete CACAO 4123
part_of	GO:0005694	chromosome	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q969X6	C		Seeded From UniProt	complete
part_of	GO:0001650	fibrillar center	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q969X6	C		Seeded From UniProt	complete
part_of	GO:0034455	t-UTP complex	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q969X6	C		Seeded From UniProt	complete
involved_in	GO:0030490	maturation of SSU-rRNA	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q969X6	P		Seeded From UniProt	complete
part_of	GO:0005730	nucleolus	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q969X6	C		Seeded From UniProt	complete
part_of	GO:0034455	t-UTP complex		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000520350 SGD:S000002732 UniProtKB:Q969X6	C		Seeded From UniProt	complete
part_of	GO:0032040	small-subunit processome		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000520350 SGD:S000002732 UniProtKB:A0A1D8PJD3	C		Seeded From UniProt	complete
part_of	GO:0030686	90S preribosome		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000520350 SGD:S000002732	C		Seeded From UniProt	complete
involved_in	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000520350 SGD:S000002732	P		Seeded From UniProt	complete
part_of	GO:0034455	t-UTP complex	GO_REF:0000096	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q969X6	C		Seeded From UniProt	complete
acts_upstream_of_or_within	GO:0030490	maturation of SSU-rRNA	GO_REF:0000096	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q969X6	P		Seeded From UniProt	complete
acts_upstream_of_or_within	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000096	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q969X6	P		Seeded From UniProt	complete
part_of	GO:0005730	nucleolus	GO_REF:0000096	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q969X6	C		Seeded From UniProt	complete
part_of	GO:0005694	chromosome	GO_REF:0000096	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q969X6	C		Seeded From UniProt	complete
part_of	GO:0001650	fibrillar center	GO_REF:0000096	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q969X6	C		Seeded From UniProt	complete
part_of	GO:0034455	t-UTP complex	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q969X6 ensembl:ENSP00000327179	C		Seeded From UniProt	complete
involved_in	GO:0030490	maturation of SSU-rRNA	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q969X6 ensembl:ENSP00000327179	P		Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q969X6 ensembl:ENSP00000327179	P		Seeded From UniProt	complete
part_of	GO:0005730	nucleolus	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q969X6 ensembl:ENSP00000327179	C		Seeded From UniProt	complete
part_of	GO:0005694	chromosome	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q969X6 ensembl:ENSP00000327179	C		Seeded From UniProt	complete
part_of	GO:0001650	fibrillar center	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q969X6 ensembl:ENSP00000327179	C		Seeded From UniProt	complete
part_of	GO:0005694	chromosome	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0158 UniProtKB-SubCell:SL-0468	C		Seeded From UniProt	complete
involved_in	GO:0006364	rRNA processing	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0698	P		Seeded From UniProt	complete
involved_in	GO:0042254	ribosome biogenesis	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0690	P		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0539	C		Seeded From UniProt	complete
part_of	GO:0005730	nucleolus	GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-SubCell:SL-0188	C		Seeded From UniProt	complete
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References

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