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HUMAN:UBE2B
Contents
Species (Taxon ID) | Homo sapiens (Human). (9606) | |
Gene Name(s) | UBE2B (synonyms: RAD6B) | |
Protein Name(s) | Ubiquitin-conjugating enzyme E2 B
RAD6 homolog B HR6B hHR6B Ubiquitin carrier protein B Ubiquitin-conjugating enzyme E2-17 kDa Ubiquitin-protein ligase B | |
External Links | ||
UniProt | P63146 | |
EMBL | M74525 X53251 BT007071 CR407634 DQ090910 AK312012 CH471062 CH471062 BC005979 BC008404 BC008470 | |
CCDS | CCDS4174.1 | |
PIR | B41222 | |
RefSeq | NP_003328.1 | |
UniGene | Hs.612096 Hs.730071 | |
PDB | 1JAS 1NXA 2Y4W 2YB6 2YBF | |
PDBsum | 1JAS 1NXA 2Y4W 2YB6 2YBF | |
ProteinModelPortal | P63146 | |
SMR | P63146 | |
BioGrid | 113168 | |
DIP | DIP-29832N | |
IntAct | P63146 | |
MINT | MINT-97455 | |
STRING | 9606.ENSP00000265339 | |
DMDM | 52783814 | |
MaxQB | P63146 | |
PaxDb | P63146 | |
PRIDE | P63146 | |
DNASU | 7320 | |
Ensembl | ENST00000265339 | |
GeneID | 7320 | |
KEGG | hsa:7320 | |
UCSC | uc003kzh.3 | |
CTD | 7320 | |
GeneCards | GC05P133706 | |
HGNC | HGNC:12473 | |
MIM | 179095 | |
neXtProt | NX_P63146 | |
PharmGKB | PA37123 | |
eggNOG | COG5078 | |
GeneTree | ENSGT00730000110565 | |
HOGENOM | HOG000233454 | |
HOVERGEN | HBG063308 | |
InParanoid | P63146 | |
KO | K10574 | |
OMA | IVEQSWV | |
OrthoDB | EOG7M0NTH | |
PhylomeDB | P63146 | |
TreeFam | TF101128 | |
Reactome | REACT_75842 | |
SignaLink | P63146 | |
UniPathway | UPA00143 | |
ChiTaRS | UBE2B | |
EvolutionaryTrace | P63146 | |
GeneWiki | UBE2B | |
GenomeRNAi | 7320 | |
NextBio | 28622 | |
PRO | PR:P63146 | |
Proteomes | UP000005640 | |
Bgee | P63146 | |
CleanEx | HS_UBE2B | |
ExpressionAtlas | P63146 | |
Genevestigator | P63146 | |
GO | GO:0000785 GO:0005737 GO:0033503 GO:0000790 GO:0005634 GO:0005886 GO:0005657 GO:0001741 GO:0016881 GO:0005524 GO:0031625 GO:0004842 GO:0060070 GO:0006974 GO:0032869 GO:0051026 GO:0006281 GO:0033522 GO:0070076 GO:0001701 GO:0006344 GO:0043066 GO:0043951 GO:0033128 GO:0010845 GO:0006301 GO:0043161 GO:0051865 GO:0070979 GO:0070936 GO:0070534 GO:0006513 GO:0000209 GO:0050821 GO:0016567 GO:0042493 GO:0001666 GO:0009411 GO:0007288 GO:0007283 GO:0070193 GO:0006511 | |
Gene3D | 3.10.110.10 | |
InterPro | IPR000608 IPR023313 IPR016135 | |
Pfam | PF00179 | |
SUPFAM | SSF54495 | |
PROSITE | PS00183 PS50127 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0070979 |
protein K11-linked ubiquitination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0070936 |
protein K48-linked ubiquitination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0070534 |
protein K63-linked ubiquitination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090263 |
positive regulation of canonical Wnt signaling pathway |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051865 |
protein autoubiquitination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050821 |
protein stabilization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_input:(UniProtKB:P35222) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043951 |
negative regulation of cAMP-mediated signaling |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0043161 |
proteasome-mediated ubiquitin-dependent protein catabolic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042493 |
response to drug |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0033522 |
histone H2A ubiquitination |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0033503 |
HULC complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016567 |
protein ubiquitination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016567 |
protein ubiquitination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009411 |
response to UV |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006513 |
protein monoubiquitination |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_input:(UniProtKB:P35222) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006511 |
ubiquitin-dependent protein catabolic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006511 |
ubiquitin-dependent protein catabolic process |
ECO:0000303 |
author statement without traceable support used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006301 |
postreplication repair |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006301 |
postreplication repair |
ECO:0000303 |
author statement without traceable support used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005657 |
replication fork |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_direct_input:(UniProtKB:P35222) |
Seeded From UniProt |
complete | ||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0000785 |
chromatin |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000209 |
protein polyubiquitination |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_input:(UniProtKB:P35222) |
Seeded From UniProt |
complete | ||
enables |
GO:0061631 |
ubiquitin conjugating enzyme activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:102944 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043161 |
proteasome-mediated ubiquitin-dependent protein catabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0004436 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0033503 |
HULC complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000630652 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0004436 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0000790 |
nuclear chromatin |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:102944 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000209 |
protein polyubiquitination |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000630651 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090263 |
positive regulation of canonical Wnt signaling pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070193 |
synaptonemal complex organization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070076 |
histone lysine demethylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0061631 |
ubiquitin conjugating enzyme activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051026 |
chiasma assembly |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045141 |
meiotic telomere clustering |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043066 |
negative regulation of apoptotic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0033128 |
negative regulation of histone phosphorylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0031056 |
regulation of histone modification |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010845 |
positive regulation of reciprocal meiotic recombination |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007288 |
sperm axoneme assembly |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007283 |
spermatogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006344 |
maintenance of chromatin silencing |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0001741 |
XY body |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001701 |
in utero embryonic development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0000790 |
nuclear chromatin |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0000785 |
chromatin |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P63147 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007283 |
spermatogenesis |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042769 |
DNA damage response, detection of DNA damage |
Reactome:R-HSA-110314 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016567 |
protein ubiquitination |
Reactome:R-HSA-8866654 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
P |
Seeded From UniProt |
complete | |
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-HSA-8943041 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016567 |
protein ubiquitination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00143 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 David, Y et al. (2010) The E2 ubiquitin-conjugating enzymes direct polyubiquitination to preferred lysines. J. Biol. Chem. 285 8595-604 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Ryu, KS et al. (2008) Direct characterization of E2-dependent target specificity and processivity using an artificial p27-linker-E2 ubiquitination system. BMB Rep 41 852-7 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 Shekhar, MP et al. (2008) Rad6B is a positive regulator of beta-catenin stabilization. Cancer Res. 68 1741-50 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 Pati, D et al. (1999) Human Cdc34 and Rad6B ubiquitin-conjugating enzymes target repressors of cyclic AMP-induced transcription for proteolysis. Mol. Cell. Biol. 19 5001-13 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 Lyakhovich, A & Shekhar, MP (2004) RAD6B overexpression confers chemoresistance: RAD6 expression during cell cycle and its redistribution to chromatin during DNA damage-induced response. Oncogene 23 3097-106 PubMed GONUTS page
- ↑ Kim, J et al. (2009) RAD6-Mediated transcription-coupled H2B ubiquitylation directly stimulates H3K4 methylation in human cells. Cell 137 459-71 PubMed GONUTS page
- ↑ Xin, H et al. (2000) The human RAD18 gene product interacts with HHR6A and HHR6B. Nucleic Acids Res. 28 2847-54 PubMed GONUTS page
- ↑ 8.0 8.1 Tsuji, Y et al. (2008) Recognition of forked and single-stranded DNA structures by human RAD18 complexed with RAD6B protein triggers its recruitment to stalled replication forks. Genes Cells 13 343-54 PubMed GONUTS page
- ↑ 9.0 9.1 Koken, MH et al. (1991) Structural and functional conservation of two human homologs of the yeast DNA repair gene RAD6. Proc. Natl. Acad. Sci. U.S.A. 88 8865-9 PubMed GONUTS page
- ↑ 10.0 10.1 Koken, MH et al. (1992) Localization of two human homologs, HHR6A and HHR6B, of the yeast DNA repair gene RAD6 to chromosomes Xq24-q25 and 5q23-q31. Genomics 12 447-53 PubMed GONUTS page
- ↑ 11.0 11.1 11.2 11.3 11.4 11.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Suryavathi, V et al. () Novel variants in UBE2B gene and idiopathic male infertility. J. Androl. 29 564-71 PubMed GONUTS page
c
m
n
o
p
- GO:0005886 ! plasma membrane
- GO:0010845 ! positive regulation of reciprocal meiotic recombination
- GO:0090263 ! positive regulation of canonical Wnt signaling pathway
- GO:0006301 ! postreplication repair
- Primates
- GO:0043161 ! proteasome-mediated ubiquitin-dependent protein catabolic process
- GO:0051865 ! protein autoubiquitination
- GO:0070979 ! protein K11-linked ubiquitination
- GO:0070936 ! protein K48-linked ubiquitination
- GO:0070534 ! protein K63-linked ubiquitination
- GO:0006513 ! protein monoubiquitination
- GO:0000209 ! protein polyubiquitination
- GO:0050821 ! protein stabilization
- GO:0016567 ! protein ubiquitination
s
u