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HUMAN:TSNAX
Contents
| Species (Taxon ID) | Homo sapiens (Human). (9606) | |
| Gene Name(s) | TSNAX (synonyms: TRAX) | |
| Protein Name(s) | Translin-associated protein X
Translin-associated factor X | |
| External Links | ||
| UniProt | Q99598 | |
| EMBL | X95073 AF271269 AF271267 AF271268 AK313068 AL626763 AL445524 AL445524 AL626763 CH471098 BC010376 BC011797 | |
| CCDS | CCDS1596.1 | |
| RefSeq | NP_005990.1 | |
| UniGene | Hs.13318 | |
| PDB | 3PJA 3QB5 | |
| PDBsum | 3PJA 3QB5 | |
| ProteinModelPortal | Q99598 | |
| SMR | Q99598 | |
| BioGrid | 113108 | |
| DIP | DIP-29463N | |
| IntAct | Q99598 | |
| MINT | MINT-1347706 | |
| STRING | 9606.ENSP00000355599 | |
| PhosphoSite | Q99598 | |
| DMDM | 6136057 | |
| MaxQB | Q99598 | |
| PaxDb | Q99598 | |
| PeptideAtlas | Q99598 | |
| PRIDE | Q99598 | |
| DNASU | 7257 | |
| Ensembl | ENST00000366639 | |
| GeneID | 7257 | |
| KEGG | hsa:7257 | |
| UCSC | uc001huw.3 | |
| CTD | 7257 | |
| GeneCards | GC01P231664 | |
| HGNC | HGNC:12380 | |
| HPA | CAB034263 HPA031054 HPA031055 | |
| MIM | 602964 | |
| neXtProt | NX_Q99598 | |
| PharmGKB | PA37048 | |
| eggNOG | COG2178 | |
| GeneTree | ENSGT00390000014716 | |
| HOGENOM | HOG000008075 | |
| HOVERGEN | HBG059067 | |
| InParanoid | Q99598 | |
| OMA | CISSVGN | |
| OrthoDB | EOG7XWPPR | |
| PhylomeDB | Q99598 | |
| TreeFam | TF323633 | |
| Reactome | REACT_118560 | |
| ChiTaRS | TSNAX | |
| GeneWiki | TSNAX | |
| GenomeRNAi | 7257 | |
| NextBio | 28373 | |
| PRO | PR:Q99598 | |
| Proteomes | UP000005640 | |
| Bgee | Q99598 | |
| CleanEx | HS_TSNAX | |
| ExpressionAtlas | Q99598 | |
| Genevestigator | Q99598 | |
| GO | GO:0005794 GO:0005634 GO:0048471 GO:0003677 GO:0046872 GO:0044822 GO:0008565 GO:0043565 GO:0030154 GO:0007275 GO:0015031 GO:0007283 | |
| Gene3D | 1.20.58.190 1.20.58.200 | |
| InterPro | IPR002848 IPR016069 IPR016068 | |
| PANTHER | PTHR10741 | |
| Pfam | PF01997 | |
| SUPFAM | SSF74784 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0003723 |
RNA binding |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000077814 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:109263 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:109263 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004521 |
endoribonuclease activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0033528 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003697 |
single-stranded DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000077814 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0090502 |
RNA phosphodiester bond hydrolysis, endonucleolytic |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0004521 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0044877 |
protein-containing complex binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9JHB5 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9JHB5 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0031687 |
A2A adenosine receptor binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9JHB5 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003697 |
single-stranded DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9JHB5 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9QZE7 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR002848 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0030422 |
production of siRNA involved in RNA interference |
Reactome:R-HSA-426486 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005829 |
cytosol |
Reactome:R-HSA-9023909 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007283 |
spermatogenesis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0030154 |
cell differentiation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Baltz, AG et al. (2012) The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. Mol. Cell 46 674-90 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Aoki, K et al. (1997) Isolation and characterization of a cDNA encoding a Translin-like protein, TRAX. FEBS Lett. 401 109-12 PubMed GONUTS page
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