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HUMAN:RP9
Contents
| Species (Taxon ID) | Homo sapiens (Human). (9606) | |
| Gene Name(s) | RP9 | |
| Protein Name(s) | Retinitis pigmentosa 9 protein
Pim-1-associated protein PAP-1 | |
| External Links | ||
| UniProt | Q8TA86 | |
| EMBL | AX016710 BC025928 | |
| CCDS | CCDS5440.1 | |
| RefSeq | NP_976033.1 | |
| UniGene | Hs.326805 | |
| ProteinModelPortal | Q8TA86 | |
| BioGrid | 112027 | |
| IntAct | Q8TA86 | |
| STRING | 9606.ENSP00000297157 | |
| iPTMnet | Q8TA86 | |
| PhosphoSitePlus | Q8TA86 | |
| BioMuta | RP9 | |
| DMDM | 38372427 | |
| EPD | Q8TA86 | |
| MaxQB | Q8TA86 | |
| PaxDb | Q8TA86 | |
| PeptideAtlas | Q8TA86 | |
| PRIDE | Q8TA86 | |
| DNASU | 6100 | |
| Ensembl | ENST00000297157 | |
| GeneID | 6100 | |
| KEGG | hsa:6100 | |
| UCSC | uc003tdm.4 | |
| CTD | 6100 | |
| DisGeNET | 6100 | |
| GeneCards | RP9 | |
| GeneReviews | RP9 | |
| HGNC | HGNC:10288 | |
| HPA | HPA031523 HPA050778 | |
| MalaCards | RP9 | |
| MIM | 180104 607331 | |
| neXtProt | NX_Q8TA86 | |
| OpenTargets | ENSG00000164610 | |
| Orphanet | 791 | |
| PharmGKB | PA34650 | |
| eggNOG | ENOG410ITQW ENOG4111TFK | |
| GeneTree | ENSGT00510000047055 | |
| HOGENOM | HOG000132948 | |
| HOVERGEN | HBG047374 | |
| InParanoid | Q8TA86 | |
| KO | K19604 | |
| OMA | NKRHEKE | |
| OrthoDB | EOG091G0X0Z | |
| PhylomeDB | Q8TA86 | |
| TreeFam | TF329160 | |
| ChiTaRS | RP9 | |
| GeneWiki | RP9 | |
| GenomeRNAi | 6100 | |
| PRO | PR:Q8TA86 | |
| Proteomes | UP000005640 | |
| Bgee | ENSG00000164610 | |
| CleanEx | HS_RP9 | |
| ExpressionAtlas | Q8TA86 | |
| Genevisible | Q8TA86 | |
| GO | GO:0005829 GO:0005634 GO:0005785 GO:0046872 GO:0003723 GO:0050890 GO:0008380 | |
| Gene3D | 3.80.10.10 | |
| InterPro | IPR032675 IPR034585 | |
| PANTHER | PTHR35252 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0050890 |
cognition |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
| GO:0046872 |
metal ion binding |
ECO:0000314 |
F |
Metal ion adherence during RNA splicing, dysfunction of this causes the initiation of Retinitis pigmentosa. |
complete | |||||
|
enables |
GO:0003723 |
RNA binding |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005785 |
signal recognition particle receptor complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P97762 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0008380 |
RNA splicing |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008380 |
RNA splicing |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Swaminathan, S et al. (2012) Analysis of copy number variation in Alzheimer's disease in a cohort of clinically characterized and neuropathologically verified individuals. PLoS ONE 7 e50640 PubMed GONUTS page
- ↑ Lv, JN et al. (2017) Targeted RP9 ablation and mutagenesis in mouse photoreceptor cells by CRISPR-Cas9. Sci Rep 7 43062 PubMed GONUTS page
- ↑ Baltz, AG et al. (2012) The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. Mol. Cell 46 674-90 PubMed GONUTS page
- ↑ Maita, H et al. (2005) CIR, a corepressor of CBF1, binds to PAP-1 and effects alternative splicing. Exp. Cell Res. 303 375-87 PubMed GONUTS page
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