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HUMAN:RBM7
Contents
| Species (Taxon ID) | Homo sapiens (Human). (9606) | |
| Gene Name(s) | RBM7 | |
| Protein Name(s) | RNA-binding protein 7
RNA-binding motif protein 7 | |
| External Links | ||
| UniProt | Q9Y580 | |
| EMBL | AF156098 AK002015 AK312619 CH471065 BC034381 | |
| CCDS | CCDS8370.1 | |
| RefSeq | NP_001272974.1 NP_001272975.1 NP_001272976.1 NP_001272977.1 NP_057174.1 | |
| UniGene | Hs.7527 | |
| PDB | 2M8H 5IQQ 5LXR 5LXY | |
| PDBsum | 2M8H 5IQQ 5LXR 5LXY | |
| ProteinModelPortal | Q9Y580 | |
| SMR | Q9Y580 | |
| BioGrid | 115478 | |
| DIP | DIP-48833N | |
| IntAct | Q9Y580 | |
| MINT | MINT-1453692 | |
| STRING | 9606.ENSP00000439918 | |
| iPTMnet | Q9Y580 | |
| PhosphoSitePlus | Q9Y580 | |
| DMDM | 9978697 | |
| EPD | Q9Y580 | |
| MaxQB | Q9Y580 | |
| PaxDb | Q9Y580 | |
| PeptideAtlas | Q9Y580 | |
| PRIDE | Q9Y580 | |
| DNASU | 10179 | |
| Ensembl | ENST00000540163 | |
| GeneID | 10179 | |
| KEGG | hsa:10179 | |
| UCSC | uc001pov.5 | |
| CTD | 10179 | |
| DisGeNET | 10179 | |
| GeneCards | RBM7 | |
| HGNC | HGNC:9904 | |
| HPA | HPA013993 HPA048003 | |
| MIM | 612413 | |
| neXtProt | NX_Q9Y580 | |
| OpenTargets | ENSG00000076053 | |
| PharmGKB | PA34269 | |
| eggNOG | KOG4454 ENOG41123B7 | |
| GeneTree | ENSGT00870000136493 | |
| HOGENOM | HOG000059553 | |
| HOVERGEN | HBG009324 | |
| InParanoid | Q9Y580 | |
| KO | K13188 | |
| PhylomeDB | Q9Y580 | |
| TreeFam | TF323596 | |
| GeneWiki | RBM7 | |
| GenomeRNAi | 10179 | |
| PRO | PR:Q9Y580 | |
| Proteomes | UP000005640 | |
| Bgee | ENSG00000076053 | |
| CleanEx | HS_RBM7 | |
| ExpressionAtlas | Q9Y580 | |
| Genevisible | Q9Y580 | |
| GO | GO:0005634 GO:0000166 GO:0003723 GO:0003727 GO:0051321 GO:0000381 | |
| CDD | cd12592 | |
| Gene3D | 3.30.70.330 | |
| InterPro | IPR012677 IPR034500 IPR000504 | |
| Pfam | PF00076 | |
| SMART | SM00360 | |
| SUPFAM | SSF54928 | |
| PROSITE | PS50102 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0000381 |
regulation of alternative mRNA splicing, via spliceosome |
ECO:0000315 |
P |
Provides regulation for the process of alternative splicing through interacting with spliceosome proteins. |
complete | |||||
|
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
NOT|part_of |
GO:0005730 |
nucleolus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001012985 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003727 |
single-stranded RNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001012985 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000381 |
regulation of alternative mRNA splicing, via spliceosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001012985 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0051321 |
meiotic cell cycle |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Falk, S et al. (2016) Structure of the RBM7-ZCCHC8 core of the NEXT complex reveals connections to splicing factors. Nat Commun 7 13573 PubMed GONUTS page
- ↑ Gustafson, MP et al. (2005) Zcchc8 is a glycogen synthase kinase-3 substrate that interacts with RNA-binding proteins. Biochem. Biophys. Res. Commun. 338 1359-67 PubMed GONUTS page
- ↑ 3.0 3.1 Lubas, M et al. (2011) Interaction profiling identifies the human nuclear exosome targeting complex. Mol. Cell 43 624-37 PubMed GONUTS page
- ↑ Baltz, AG et al. (2012) The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. Mol. Cell 46 674-90 PubMed GONUTS page
- ↑ Castello, A et al. (2012) Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Cell 149 1393-406 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
