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HUMAN:NPC1
Contents
Species (Taxon ID) | Homo sapiens (Human). (9606) | |
Gene Name(s) | NPC1 | |
Protein Name(s) | Niemann-Pick C1 protein | |
External Links | ||
UniProt | O15118 | |
EMBL | AF002020 AF157379 AF157365 AF157366 AF157367 AF157368 AF157369 AF157370 AF157371 AF157372 AF157373 AF157374 AF157375 AF157376 AF157377 AF157378 AF338230 AH009108 AK293779 AC010853 AC026634 BC063302 | |
CCDS | CCDS11878.1 | |
RefSeq | NP_000262.2 | |
UniGene | Hs.464779 Hs.715623 | |
PDB | 3GKH 3GKI 3GKJ | |
PDBsum | 3GKH 3GKI 3GKJ | |
ProteinModelPortal | O15118 | |
SMR | O15118 | |
BioGrid | 110925 | |
IntAct | O15118 | |
STRING | 9606.ENSP00000269228 | |
BindingDB | O15118 | |
ChEMBL | CHEMBL1293277 | |
TCDB | 2.A.6.6.1 | |
PhosphoSite | O15118 | |
MaxQB | O15118 | |
PaxDb | O15118 | |
PeptideAtlas | O15118 | |
PRIDE | O15118 | |
Ensembl | ENST00000269228 | |
GeneID | 4864 | |
KEGG | hsa:4864 | |
UCSC | uc002kum.4 | |
CTD | 4864 | |
GeneCards | GC18M021111 | |
GeneReviews | NPC1 | |
H-InvDB | HIX0039703 | |
HGNC | HGNC:7897 | |
HPA | HPA026618 | |
MIM | 257220 607623 | |
neXtProt | NX_O15118 | |
Orphanet | 216986 216981 216978 216975 216972 | |
PharmGKB | PA31698 | |
eggNOG | NOG149152 | |
GeneTree | ENSGT00760000119174 | |
HOVERGEN | HBG003913 | |
InParanoid | O15118 | |
KO | K12385 | |
OMA | DNITETM | |
OrthoDB | EOG7QRQT0 | |
PhylomeDB | O15118 | |
TreeFam | TF300416 | |
ChiTaRS | NPC1 | |
EvolutionaryTrace | O15118 | |
GeneWiki | NPC1 | |
GenomeRNAi | 4864 | |
NextBio | 18738 | |
PRO | PR:O15118 | |
Proteomes | UP000005640 | |
Bgee | O15118 | |
CleanEx | HS_NPC1 | |
ExpressionAtlas | O15118 | |
Genevestigator | O15118 | |
GO | GO:0005783 GO:0005576 GO:0070062 GO:0005794 GO:0016021 GO:0005887 GO:0031902 GO:0005765 GO:0005764 GO:0016020 GO:0045121 GO:0005635 GO:0048471 GO:0015485 GO:0008158 GO:0004872 GO:0015248 GO:0004888 GO:0007628 GO:0006914 GO:0008206 GO:0071404 GO:0071383 GO:0033344 GO:0042632 GO:0008203 GO:0030301 GO:0006897 GO:0090150 GO:0007041 GO:0031579 GO:0060548 GO:0016242 GO:0006486 GO:0046686 GO:0042493 GO:0007165 | |
InterPro | IPR004765 IPR003392 IPR000731 | |
Pfam | PF02460 | |
TIGRFAMs | TIGR00917 | |
PROSITE | PS50156 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0046718 |
entry of virus into host cell |
ECO:0000315 |
P |
Fig. 4D |
complete | |||||
GO:2000189 |
positive regulation of cholesterol homeostasis |
ECO:0000315 |
P |
Fig 1,2 and Table 1 shows NPC-1's role in correcting the over accumulation of choloesterol in lysosomes versus the defective mutant |
complete | |||||
GO:0046718 |
entry of virus into host cell |
ECO:0000315 |
P |
Fig. 2B (infection) and 2C/2D (virus entry into cell) |
complete | |||||
involved_in |
GO:0032367 |
intracellular cholesterol transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032367 |
intracellular cholesterol transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046718 |
viral entry into host cell |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046718 |
viral entry into host cell |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090150 |
establishment of protein localization to membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0070062 |
extracellular exosome |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0001088) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0031579 |
membrane raft organization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:1905103 |
integral component of lysosomal membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:1905103 |
integral component of lysosomal membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032367 |
intracellular cholesterol transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0033344 |
cholesterol efflux |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030301 |
cholesterol transport |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0015485 |
cholesterol binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008206 |
bile acid metabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007041 |
lysosomal transport |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006486 |
protein glycosylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005765 |
lysosomal membrane |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005764 |
lysosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005635 |
nuclear envelope |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005576 |
extracellular region |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006914 |
autophagy |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060548 |
negative regulation of cell death |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:G3V7K5 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0046686 |
response to cadmium ion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:G3V7K5 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071404 |
cellular response to low-density lipoprotein particle stimulus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071383 |
cellular response to steroid hormone stimulus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0046718 |
viral entry into host cell |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0045121 |
membrane raft |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042493 |
response to drug |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0033344 |
cholesterol efflux |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0031982 |
vesicle |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016242 |
negative regulation of macroautophagy |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0016020 |
membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007628 |
adult walking behavior |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006897 |
endocytosis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006486 |
protein glycosylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005768 |
endosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005764 |
lysosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005635 |
nuclear envelope |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005576 |
extracellular region |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O35604 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0005319 |
lipid transporter activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0015248 |
sterol transporter activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005764 |
lysosome |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004888 |
transmembrane signaling receptor activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0038023 |
signaling receptor activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034383 |
low-density lipoprotein particle clearance |
Reactome:R-HSA-8964038 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005765 |
lysosomal membrane |
Reactome:R-HSA-8876485 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006629 |
lipid metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016032 |
viral process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005768 |
endosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008203 |
cholesterol metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005764 |
lysosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0001618 |
virus receptor activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008202 |
steroid metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005765 |
lysosomal membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0031902 |
late endosome membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Carette, JE et al. (2011) Ebola virus entry requires the cholesterol transporter Niemann-Pick C1. Nature 477 340-3 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 Watari, H et al. (1999) Niemann-Pick C1 protein: obligatory roles for N-terminal domains and lysosomal targeting in cholesterol mobilization. Proc. Natl. Acad. Sci. U.S.A. 96 805-10 PubMed GONUTS page
- ↑ 3.0 3.1 Côté, M et al. (2011) Small molecule inhibitors reveal Niemann-Pick C1 is essential for Ebola virus infection. Nature 477 344-8 PubMed GONUTS page
- ↑ Gong, X et al. (2016) Structural Insights into the Niemann-Pick C1 (NPC1)-Mediated Cholesterol Transfer and Ebola Infection. Cell 165 1467-1478 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 Carstea, ED et al. (1997) Niemann-Pick C1 disease gene: homology to mediators of cholesterol homeostasis. Science 277 228-31 PubMed GONUTS page
- ↑ Ghosh, D et al. (2010) Defining the membrane proteome of NK cells. J Mass Spectrom 45 1-25 PubMed GONUTS page
- ↑ 7.0 7.1 Domon, MM et al. (2013) Interaction of AnxA6 with isolated and artificial lipid microdomains; importance of lipid composition and calcium content. Mol Biosyst 9 668-76 PubMed GONUTS page
- ↑ Gonzales, PA et al. (2009) Large-scale proteomics and phosphoproteomics of urinary exosomes. J. Am. Soc. Nephrol. 20 363-79 PubMed GONUTS page
- ↑ 9.0 9.1 9.2 Li, X et al. (2017) 3.3 Å structure of Niemann-Pick C1 protein reveals insights into the function of the C-terminal luminal domain in cholesterol transport. Proc. Natl. Acad. Sci. U.S.A. 114 9116-9121 PubMed GONUTS page
- ↑ Rigamonti, E et al. (2005) Liver X receptor activation controls intracellular cholesterol trafficking and esterification in human macrophages. Circ. Res. 97 682-9 PubMed GONUTS page
- ↑ 11.0 11.1 11.2 Blom, TS et al. (2003) Defective endocytic trafficking of NPC1 and NPC2 underlying infantile Niemann-Pick type C disease. Hum. Mol. Genet. 12 257-72 PubMed GONUTS page
- ↑ Frolov, A et al. (2003) NPC1 and NPC2 regulate cellular cholesterol homeostasis through generation of low density lipoprotein cholesterol-derived oxysterols. J. Biol. Chem. 278 25517-25 PubMed GONUTS page
- ↑ 13.0 13.1 Infante, RE et al. (2008) NPC2 facilitates bidirectional transfer of cholesterol between NPC1 and lipid bilayers, a step in cholesterol egress from lysosomes. Proc. Natl. Acad. Sci. U.S.A. 105 15287-92 PubMed GONUTS page
- ↑ 14.0 14.1 Davies, JP & Ioannou, YA (2000) Topological analysis of Niemann-Pick C1 protein reveals that the membrane orientation of the putative sterol-sensing domain is identical to those of 3-hydroxy-3-methylglutaryl-CoA reductase and sterol regulatory element binding protein cleavage-activating protein. J. Biol. Chem. 275 24367-74 PubMed GONUTS page
- ↑ Schröder, B et al. (2007) Integral and associated lysosomal membrane proteins. Traffic 8 1676-86 PubMed GONUTS page
- ↑ Pacheco, CD et al. (2009) Tau deletion exacerbates the phenotype of Niemann-Pick type C mice and implicates autophagy in pathogenesis. Hum. Mol. Genet. 18 956-65 PubMed GONUTS page
- ↑ 17.0 17.1 Greer, WL et al. (1999) Mutations in NPC1 highlight a conserved NPC1-specific cysteine-rich domain. Am. J. Hum. Genet. 65 1252-60 PubMed GONUTS page
c
- Catarrhini
- GO:0071383 ! cellular response to steroid hormone stimulus
- GO:0071404 ! cellular response to low-density lipoprotein particle stimulus
- GO:0030301 ! cholesterol transport
- GO:0008203 ! cholesterol metabolic process
- GO:0015485 ! cholesterol binding
- GO:0042632 ! cholesterol homeostasis
- GO:0033344 ! cholesterol efflux
- Chordata
- Craniata
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