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HUMAN:FMR1

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Species (Taxon ID) Homo sapiens (Human). (9606)
Gene Name(s) FMR1
Protein Name(s) Fragile X mental retardation protein 1

FMRP Protein FMR-1

External Links
UniProt Q06787
EMBL L29074
L29074
L29074
L29074
L29074
L29074
KJ534836
CH471171
CH471171
CH471171
CH471171
CH471171
CH471171
BC086957
M67468
X69962
S65791
L19476
L19477
L19478
L19479
L19480
L19481
L19482
L19483
L19484
L19485
L19486
L19487
L19488
L19489
L19490
L19491
L19492
L19493
S76590
CCDS CCDS14682.1
CCDS55519.1
CCDS76039.1
PIR I68614
S45243
RefSeq NP_001172004.1
NP_001172005.1
NP_001172010.1
NP_001172011.1
NP_002015.1
UniGene Hs.103183
PDB 2BKD
2FMR
2LA5
2QND
PDBsum 2BKD
2FMR
2LA5
2QND
DisProt DP00134
ProteinModelPortal Q06787
SMR Q06787
BioGrid 108619
DIP DIP-29022N
DIP-29509N
IntAct Q06787
MINT MINT-108156
STRING 9606.ENSP00000359506
PhosphoSite Q06787
DMDM 544328
MaxQB Q06787
PaxDb Q06787
PRIDE Q06787
Ensembl ENST00000218200
ENST00000370470
ENST00000370475
ENST00000440235
GeneID 2332
KEGG hsa:2332
UCSC uc004fck.4
uc010nst.3
uc022cge.1
CTD 2332
GeneCards GC0XP146993
GeneReviews FMR1
HGNC HGNC:3775
HPA CAB012444
HPA050118
MIM 300623
300624
309550
311360
neXtProt NX_Q06787
Orphanet 908
93256
619
261483
PharmGKB PA28191
eggNOG NOG75351
GeneTree ENSGT00390000017033
HOVERGEN HBG005739
InParanoid Q06787
KO K15516
OMA KAWQGMV
PhylomeDB Q06787
TreeFam TF105427
ChiTaRS FMR1
EvolutionaryTrace Q06787
GeneWiki FMR1
GenomeRNAi 2332
NextBio 9465
PRO PR:Q06787
Proteomes UP000005640
Bgee Q06787
CleanEx HS_FMR1
ExpressionAtlas Q06787
Genevestigator Q06787
GO GO:0044297
GO:0005737
GO:0036464
GO:0010494
GO:0043198
GO:0043197
GO:0016020
GO:0005874
GO:0005845
GO:0071598
GO:0005730
GO:0005654
GO:0005844
GO:0045202
GO:0003729
GO:0044822
GO:0003723
GO:0007417
GO:0051028
GO:0045947
Gene3D 3.30.1370.10
InterPro IPR008395
IPR022034
IPR004087
IPR004088
Pfam PF05641
PF12235
PF00013
SMART SM00322
SUPFAM SSF54791
PROSITE PS51641
PS50084

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0035613

RNA stem-loop binding

PMID:15805463[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0008266

poly(U) RNA binding

PMID:8156595[2]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:1990812

growth cone filopodium

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

C

Seeded From UniProt

complete

part_of

GO:0045202

synapse

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

C

Seeded From UniProt

complete

part_of

GO:0032433

filopodium tip

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

C

Seeded From UniProt

complete

involved_in

GO:0060998

regulation of dendritic spine development

PMID:16631377[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0051489

regulation of filopodium assembly

PMID:16631377[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003730

mRNA 3'-UTR binding

PMID:17417632[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0060964

regulation of gene silencing by miRNA

PMID:25464849[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0002151

G-quadruplex RNA binding

PMID:25464849[5]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:1902416

positive regulation of mRNA binding

PMID:25464849[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005844

polysome

PMID:25464849[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0043488

regulation of mRNA stability

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

P

Seeded From UniProt

complete

involved_in

GO:1900453

negative regulation of long-term synaptic depression

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

P

Seeded From UniProt

complete

involved_in

GO:0007215

glutamate receptor signaling pathway

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

P

Seeded From UniProt

complete

enables

GO:0030371

translation repressor activity

PMID:11157796[6]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

PMID:11157796[6]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

PMID:11157796[6]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:1902737

dendritic filopodium

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q80WE1

C

Seeded From UniProt

complete

part_of

GO:0043204

perikaryon

PMID:15380484[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0042995

cell projection

PMID:15380484[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0030426

growth cone

PMID:15380484[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0036464

cytoplasmic ribonucleoprotein granule

PMID:15380484[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:18936162[8]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:18936162[8]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

PMID:18936162[8]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:1990904

ribonucleoprotein complex

PMID:9659908[9]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:9659908[9]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0043679

axon terminus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q80WE1

C

Seeded From UniProt

complete

part_of

GO:0043204

perikaryon

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q80WE1

C

Seeded From UniProt

complete

part_of

GO:0043197

dendritic spine

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q80WE1

C

Seeded From UniProt

complete

part_of

GO:0030425

dendrite

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q80WE1

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q80WE1

C

Seeded From UniProt

complete

involved_in

GO:0045727

positive regulation of translation

PMID:19097999[10]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:1990904

ribonucleoprotein complex

PMID:19097999[10]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005844

polysome

PMID:19097999[10]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:25225333[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

has_direct_input:(UniProtKB:Q99959)

Seeded From UniProt

complete

part_of

GO:1990124

messenger ribonucleoprotein complex

PMID:25225333[11]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:1902373

negative regulation of mRNA catabolic process

PMID:25225333[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

has_regulation_target:(UniProtKB:Q99959)

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:10496225[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q80WE1

C

Seeded From UniProt

complete

part_of

GO:0005844

polysome

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q80WE1

C

Seeded From UniProt

complete

enables

GO:1990825

sequence-specific mRNA binding

PMID:23235829[13]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

colocalizes_with

GO:0032797

SMN complex

PMID:18093976[14]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0036464

cytoplasmic ribonucleoprotein granule

PMID:18093976[14]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0043005

neuron projection

PMID:18093976[14]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0043204

perikaryon

PMID:18093976[14]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

PMID:16571602[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005730

nucleolus

PMID:16571602[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:16571602[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0002092

positive regulation of receptor internalization

PMID:25561520[16]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005844

polysome

PMID:25561520[16]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

PMID:25561520[16]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0098908

regulation of neuronal action potential

PMID:25561520[16]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0044325

ion channel binding

PMID:25561520[16]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q9JIN6

F

Seeded From UniProt

complete

enables

GO:0002151

G-quadruplex RNA binding

PMID:18653529[17]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0000381

regulation of alternative mRNA splicing, via spliceosome

PMID:18653529[17]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0046982

protein heterodimerization activity

PMID:7489725[18]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0042803

protein homodimerization activity

PMID:7489725[18]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0007215

glutamate receptor signaling pathway

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q80WE1

P

Seeded From UniProt

complete

part_of

GO:0010369

chromocenter

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

C

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

C

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

F

Seeded From UniProt

complete

involved_in

GO:0072711

cellular response to hydroxyurea

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

P

Seeded From UniProt

complete

involved_in

GO:0034644

cellular response to UV

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

P

Seeded From UniProt

complete

enables

GO:0035064

methylated histone binding

PMID:24813610[19]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0033129

positive regulation of histone phosphorylation

PMID:24813610[19]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2001022

positive regulation of response to DNA damage stimulus

PMID:24813610[19]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

PMID:24813610[19]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005844

polysome

PMID:9659908[9]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0008266

poly(U) RNA binding

PMID:7688265[20]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0034046

poly(G) binding

PMID:7688265[20]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0031369

translation initiation factor binding

PMID:24658146[21]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P55010

F

Seeded From UniProt

complete

enables

GO:0043022

ribosome binding

PMID:24658146[21]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P05388

F

Seeded From UniProt

complete

part_of

GO:0005730

nucleolus

PMID:24658146[21]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0048471

perinuclear region of cytoplasm

PMID:24658146[21]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:15381419[22]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:15381419[22]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0005844

polysome

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

C

Seeded From UniProt

complete

part_of

GO:0097386

glial cell projection

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q80WE1

C

Seeded From UniProt

complete

involved_in

GO:0045727

positive regulation of translation

PMID:19166269[23]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0070840

dynein complex binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

F

Seeded From UniProt

complete

enables

GO:0008017

microtubule binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

F

Seeded From UniProt

complete

involved_in

GO:0060999

positive regulation of dendritic spine development

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

P

Seeded From UniProt

complete

involved_in

GO:0051491

positive regulation of filopodium assembly

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

P

Seeded From UniProt

complete

involved_in

GO:0051028

mRNA transport

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

P

Seeded From UniProt

complete

part_of

GO:1902737

dendritic filopodium

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

C

Seeded From UniProt

complete

enables

GO:0035613

RNA stem-loop binding

PMID:19166269[23]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0048027

mRNA 5'-UTR binding

PMID:19166269[23]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0071598

neuronal ribonucleoprotein granule

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

C

Seeded From UniProt

complete

part_of

GO:0043197

dendritic spine

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

C

Seeded From UniProt

complete

part_of

GO:0030425

dendrite

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

C

Seeded From UniProt

complete

involved_in

GO:2000766

negative regulation of cytoplasmic translation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

P

Seeded From UniProt

complete

involved_in

GO:0098586

cellular response to virus

PMID:24514761[24]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1901254

positive regulation of intracellular transport of viral material

PMID:24514761[24]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0044830

modulation by host of viral RNA genome replication

PMID:24514761[24]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0019034

viral replication complex

PMID:24514761[24]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0098794

postsynapse

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

C

Seeded From UniProt

complete

part_of

GO:0098793

presynapse

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

C

Seeded From UniProt

complete

part_of

GO:0030424

axon

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

C

Seeded From UniProt

complete

part_of

GO:0019897

extrinsic component of plasma membrane

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

C

Seeded From UniProt

complete

involved_in

GO:1901800

positive regulation of proteasomal protein catabolic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

P

Seeded From UniProt

complete

involved_in

GO:2000301

negative regulation of synaptic vesicle exocytosis

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q80WE1

P

Seeded From UniProt

complete

involved_in

GO:1901386

negative regulation of voltage-gated calcium channel activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q80WE1

P

Seeded From UniProt

complete

involved_in

GO:0046928

regulation of neurotransmitter secretion

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q80WE1

P

Seeded From UniProt

complete

enables

GO:1990825

sequence-specific mRNA binding

PMID:12927206[25]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0033592

RNA strand annealing activity

PMID:17057366[26]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0035197

siRNA binding

PMID:17057366[26]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0035198

miRNA binding

PMID:17057366[26]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:2000637

positive regulation of gene silencing by miRNA

PMID:17057366[26]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

PMID:19946888[27]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0036464

cytoplasmic ribonucleoprotein granule

PMID:15121898[28]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0000031)

Seeded From UniProt

complete

involved_in

GO:0045947

negative regulation of translational initiation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

P

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:22658674[29]

ECO:0007005

high throughput direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:22681889[30]

ECO:0007005

high throughput direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0005845

mRNA cap binding complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P35922

C

Seeded From UniProt

complete

involved_in

GO:2001022

positive regulation of response to DNA damage stimulus

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95564
PANTHER:PTN001318101
UniProtKB:Q06787

P

Seeded From UniProt

complete

involved_in

GO:1905244

regulation of modification of synaptic structure

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95564
PANTHER:PTN000063980

P

Seeded From UniProt

complete

part_of

GO:1902737

dendritic filopodium

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95564
PANTHER:PTN001318101
RGD:2623

C

Seeded From UniProt

complete

involved_in

GO:0099578

regulation of translation at postsynapse, modulating synaptic transmission

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95564
PANTHER:PTN000063980

P

Seeded From UniProt

complete

part_of

GO:0098793

presynapse

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95564
PANTHER:PTN001318101

C

Seeded From UniProt

complete

part_of

GO:0071598

neuronal ribonucleoprotein granule

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0028734
MGI:MGI:95564
PANTHER:PTN000063980
RGD:2623

C

Seeded From UniProt

complete

involved_in

GO:0060998

regulation of dendritic spine development

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95564
PANTHER:PTN000063980
UniProtKB:Q06787

P

Seeded From UniProt

complete

involved_in

GO:0051489

regulation of filopodium assembly

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95564
PANTHER:PTN001318101
UniProtKB:Q06787

P

Seeded From UniProt

complete

involved_in

GO:0048814

regulation of dendrite morphogenesis

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0028734
PANTHER:PTN000063980

P

Seeded From UniProt

complete

involved_in

GO:0045727

positive regulation of translation

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95564
PANTHER:PTN001318100
UniProtKB:Q06787

P

Seeded From UniProt

complete

enables

GO:0045182

translation regulator activity

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0028734
PANTHER:PTN001318100

F

Seeded From UniProt

complete

part_of

GO:0044326

dendritic spine neck

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001318101
RGD:2623

C

Seeded From UniProt

complete

involved_in

GO:0043488

regulation of mRNA stability

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95564
PANTHER:PTN001318100

P

Seeded From UniProt

complete

part_of

GO:0043197

dendritic spine

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104860
MGI:MGI:95564
PANTHER:PTN000063980
RGD:2623

C

Seeded From UniProt

complete

part_of

GO:0043025

neuronal cell body

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0028734
PANTHER:PTN000063980
RGD:2623

C

Seeded From UniProt

complete

enables

GO:0042803

protein homodimerization activity

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001318100
UniProtKB:P51114
UniProtKB:P51116
UniProtKB:Q06787

F

Seeded From UniProt

complete

part_of

GO:0036464

cytoplasmic ribonucleoprotein granule

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95564
PANTHER:PTN001318100
RGD:2623
UniProtKB:Q06787

C

Seeded From UniProt

complete

part_of

GO:0035770

ribonucleoprotein granule

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104860
MGI:MGI:95564
PANTHER:PTN001318100

C

Seeded From UniProt

complete

part_of

GO:0030426

growth cone

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001318101
RGD:2623
UniProtKB:Q06787

C

Seeded From UniProt

complete

part_of

GO:0030424

axon

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104860
MGI:MGI:95564
PANTHER:PTN000063980
RGD:2623

C

Seeded From UniProt

complete

involved_in

GO:0017148

negative regulation of translation

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0028734
MGI:MGI:104860
MGI:MGI:95564
PANTHER:PTN001318100

P

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000063980
RGD:2623

C

Seeded From UniProt

complete

involved_in

GO:0008089

anterograde axonal transport

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95564
PANTHER:PTN000063980

P

Seeded From UniProt

complete

involved_in

GO:0007417

central nervous system development

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95564
PANTHER:PTN000063980

P

Seeded From UniProt

complete

part_of

GO:0005844

polysome

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104860
MGI:MGI:1346074
MGI:MGI:95564
PANTHER:PTN001318100
RGD:2623
UniProtKB:Q06787

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0028734
MGI:MGI:104860
MGI:MGI:95564
PANTHER:PTN001318100
UniProtKB:P51116
UniProtKB:Q06787

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104860
MGI:MGI:95564
PANTHER:PTN001318100
RGD:2623
UniProtKB:Q06787
Xenbase:XB-GENE-1004708
Xenbase:XB-GENE-977113

C

Seeded From UniProt

complete

enables

GO:0003730

mRNA 3'-UTR binding

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104860
MGI:MGI:95564
PANTHER:PTN001318100
UniProtKB:Q06787

F

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95564
PANTHER:PTN001318100
RGD:2623
UniProtKB:Q06787

F

Seeded From UniProt

complete

involved_in

GO:0001934

positive regulation of protein phosphorylation

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001318101
RGD:2623

P

Seeded From UniProt

complete

involved_in

GO:0000381

regulation of alternative mRNA splicing, via spliceosome

PMID:21873635[31]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95564
PANTHER:PTN001318101
UniProtKB:Q06787

P

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

PMID:21446998[32]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q06787

F

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

PMID:17850748[33]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q06787

F

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000052

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:1904115

axon cytoplasm

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0008089

C

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004087

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004088
InterPro:IPR022034
InterPro:IPR036612

F

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR040148

F

Seeded From UniProt

complete

involved_in

GO:0006417

regulation of translation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR040148

P

Seeded From UniProt

complete

enables

GO:0034046

poly(G) binding

PMID:24204304[34]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0008266

poly(U) RNA binding

PMID:24204304[34]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0015030

Cajal body

PMID:24204304[34]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:24204304[34]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:24204304[34]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0015030

Cajal body

PMID:24204304[34]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0034046

poly(G) binding

PMID:24204304[34]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0008266

poly(U) RNA binding

PMID:24204304[34]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:24204304[34]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:24204304[34]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

PMID:10888599[35]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

PMID:7692601[36]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:8156595[2]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

colocalizes_with

GO:0042788

polysomal ribosome

PMID:12837692[37]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:16407062[38]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005730

nucleolus

PMID:16407062[38]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0006397

mRNA processing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0507

P

Seeded From UniProt

complete

part_of

GO:0045202

synapse

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0770
UniProtKB-SubCell:SL-0258

C

Seeded From UniProt

complete

part_of

GO:0043005

neuron projection

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0771
UniProtKB-SubCell:SL-0261

C

Seeded From UniProt

complete

involved_in

GO:0016032

viral process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0945

P

Seeded From UniProt

complete

part_of

GO:0042995

cell projection

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0966
UniProtKB-SubCell:SL-0280

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0227

P

Seeded From UniProt

complete

part_of

GO:0030054

cell junction

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0965

C

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

involved_in

GO:0006417

regulation of translation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0810

P

Seeded From UniProt

complete

part_of

GO:0000775

chromosome, centromeric region

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0137
UniProtKB-SubCell:SL-0047

C

Seeded From UniProt

complete

involved_in

GO:0031047

gene silencing by RNA

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0943

P

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0158
UniProtKB-SubCell:SL-0468

C

Seeded From UniProt

complete

involved_in

GO:0051028

mRNA transport

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0509

P

Seeded From UniProt

complete

involved_in

GO:0007399

nervous system development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0524

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003
UniProtKB-SubCell:SL-0039

C

Seeded From UniProt

complete

involved_in

GO:0008380

RNA splicing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0508

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0045211

postsynaptic membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0628
UniProtKB-SubCell:SL-0219

C

Seeded From UniProt

complete

part_of

GO:0048471

perinuclear region of cytoplasm

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0198

C

Seeded From UniProt

complete

part_of

GO:0043204

perikaryon

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0197

C

Seeded From UniProt

complete

part_of

GO:0043197

dendritic spine

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0284

C

Seeded From UniProt

complete

part_of

GO:0015030

Cajal body

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0031

C

Seeded From UniProt

complete

part_of

GO:0010494

cytoplasmic stress granule

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0496

C

Seeded From UniProt

complete

part_of

GO:0036464

cytoplasmic ribonucleoprotein granule

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0495

C

Seeded From UniProt

complete

part_of

GO:0042734

presynaptic membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0222

C

Seeded From UniProt

complete

part_of

GO:0032433

filopodium tip

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0470

C

Seeded From UniProt

complete

part_of

GO:0005730

nucleolus

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0188

C

Seeded From UniProt

complete

part_of

GO:0030426

growth cone

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0288

C

Seeded From UniProt

complete

part_of

GO:0030424

axon

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0279

C

Seeded From UniProt

complete

part_of

GO:0030425

dendrite

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0283

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Darnell, JC et al. (2005) Kissing complex RNAs mediate interaction between the Fragile-X mental retardation protein KH2 domain and brain polyribosomes. Genes Dev. 19 903-18 PubMed GONUTS page
  2. 2.0 2.1 Siomi, H et al. (1994) Essential role for KH domains in RNA binding: impaired RNA binding by a mutation in the KH domain of FMR1 that causes fragile X syndrome. Cell 77 33-9 PubMed GONUTS page
  3. 3.0 3.1 Antar, LN et al. () Local functions for FMRP in axon growth cone motility and activity-dependent regulation of filopodia and spine synapses. Mol. Cell. Neurosci. 32 37-48 PubMed GONUTS page
  4. Zalfa, F et al. (2007) A new function for the fragile X mental retardation protein in regulation of PSD-95 mRNA stability. Nat. Neurosci. 10 578-87 PubMed GONUTS page
  5. 5.0 5.1 5.2 5.3 Kenny, PJ et al. (2014) MOV10 and FMRP regulate AGO2 association with microRNA recognition elements. Cell Rep 9 1729-1741 PubMed GONUTS page
  6. 6.0 6.1 6.2 Laggerbauer, B et al. (2001) Evidence that fragile X mental retardation protein is a negative regulator of translation. Hum. Mol. Genet. 10 329-38 PubMed GONUTS page
  7. 7.0 7.1 7.2 7.3 Schrier, M et al. (2004) Transport kinetics of FMRP containing the I304N mutation of severe fragile X syndrome in neurites of living rat PC12 cells. Exp. Neurol. 189 343-53 PubMed GONUTS page
  8. 8.0 8.1 8.2 Kim, M et al. (2009) Fragile X mental retardation protein FMRP binds mRNAs in the nucleus. Mol. Cell. Biol. 29 214-28 PubMed GONUTS page
  9. 9.0 9.1 9.2 Feng, Y et al. (1997) FMRP associates with polyribosomes as an mRNP, and the I304N mutation of severe fragile X syndrome abolishes this association. Mol. Cell 1 109-18 PubMed GONUTS page
  10. 10.0 10.1 10.2 Fähling, M et al. (2009) Translational regulation of the human achaete-scute homologue-1 by fragile X mental retardation protein. J. Biol. Chem. 284 4255-66 PubMed GONUTS page
  11. 11.0 11.1 11.2 Fischer-Kešo, R et al. (2014) Plakophilins 1 and 3 bind to FXR1 and thereby influence the mRNA stability of desmosomal proteins. Mol. Cell. Biol. 34 4244-56 PubMed GONUTS page
  12. Adinolfi, S et al. (1999) Dissecting FMR1, the protein responsible for fragile X syndrome, in its structural and functional domains. RNA 5 1248-58 PubMed GONUTS page
  13. Ascano, M Jr et al. (2012) FMRP targets distinct mRNA sequence elements to regulate protein expression. Nature 492 382-6 PubMed GONUTS page
  14. 14.0 14.1 14.2 14.3 Piazzon, N et al. (2008) In vitro and in cellulo evidences for association of the survival of motor neuron complex with the fragile X mental retardation protein. J. Biol. Chem. 283 5598-610 PubMed GONUTS page
  15. 15.0 15.1 15.2 Davidovic, L et al. (2006) The nuclear microspherule protein 58 is a novel RNA-binding protein that interacts with fragile X mental retardation protein in polyribosomal mRNPs from neurons. Hum. Mol. Genet. 15 1525-38 PubMed GONUTS page
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