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HUMAN:FIP1
Contents
| Species (Taxon ID) | Homo sapiens (Human). (9606) | |
| Gene Name(s) | FIP1L1 (synonyms: FIP1, RHE) | |
| Protein Name(s) | Pre-mRNA 3'-end-processing factor FIP1
hFip1 FIP1-like 1 protein Factor interacting with PAP Rearranged in hypereosinophilia | |
| External Links | ||
| UniProt | Q6UN15 | |
| EMBL | AY366510 AL136910 AK295737 AC058822 AC095040 AC098587 AC098821 AC105384 AC110298 AC110792 AC124017 AC138607 AC138779 CH471057 BC011543 BC017724 BC024016 BC052959 BC110383 AY229892 | |
| CCDS | CCDS3491.1 CCDS47055.1 CCDS47056.1 | |
| RefSeq | NP_001128409.1 NP_001128410.1 NP_112179.2 | |
| UniGene | Hs.624245 | |
| ProteinModelPortal | Q6UN15 | |
| BioGrid | 123545 | |
| DIP | DIP-42503N | |
| IntAct | Q6UN15 | |
| MINT | MINT-1475441 | |
| STRING | 9606.ENSP00000336752 | |
| PhosphoSite | Q6UN15 | |
| DMDM | 74749365 | |
| MaxQB | Q6UN15 | |
| PaxDb | Q6UN15 | |
| PeptideAtlas | Q6UN15 | |
| PRIDE | Q6UN15 | |
| DNASU | 81608 | |
| Ensembl | ENST00000306932 ENST00000337488 ENST00000358575 ENST00000507166 ENST00000507922 | |
| GeneID | 81608 | |
| KEGG | hsa:81608 | |
| UCSC | uc003gzx.4 uc003gzy.3 uc003gzz.3 uc011bzu.2 | |
| CTD | 81608 | |
| GeneCards | GC04P054159 | |
| HGNC | HGNC:19124 | |
| HPA | HPA037475 | |
| MIM | 607685 607686 | |
| neXtProt | NX_Q6UN15 | |
| Orphanet | 520 3260 | |
| PharmGKB | PA134875694 | |
| eggNOG | COG5213 | |
| GeneTree | ENSGT00730000111028 | |
| HOVERGEN | HBG059889 | |
| KO | K14405 | |
| OMA | GRTGNEK | |
| OrthoDB | EOG7Z3F5S | |
| PhylomeDB | Q6UN15 | |
| TreeFam | TF318610 | |
| ChiTaRS | FIP1L1 | |
| GeneWiki | FIP1L1 | |
| GenomeRNAi | 81608 | |
| NextBio | 71928 | |
| PMAP-CutDB | Q6UN15 | |
| PRO | PR:Q6UN15 | |
| Proteomes | UP000005640 | |
| Bgee | Q6UN15 | |
| CleanEx | HS_FIP1L1 | |
| ExpressionAtlas | Q6UN15 | |
| Genevestigator | Q6UN15 | |
| GO | GO:0005847 GO:0005634 GO:0044822 GO:0006397 | |
| InterPro | IPR007854 | |
| Pfam | PF05182 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0003723 |
RNA binding |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0098789 |
pre-mRNA cleavage required for polyadenylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000336935 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006378 |
mRNA polyadenylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000336935 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005847 |
mRNA cleavage and polyadenylation specificity factor complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1914149 |
C |
Seeded From UniProt |
complete | ||
|
contributes_to |
GO:0003723 |
RNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000336935 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005847 |
mRNA cleavage and polyadenylation specificity factor complex |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0098789 |
pre-mRNA cleavage required for polyadenylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0031124 |
mRNA 3'-end processing |
Reactome:R-HSA-75067 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
P |
Seeded From UniProt |
complete | |
|
involved_in |
GO:0006406 |
mRNA export from nucleus |
Reactome:R-HSA-77594 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006369 |
termination of RNA polymerase II transcription |
Reactome:R-HSA-109688 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-HSA-8849157 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
|
involved_in |
GO:0000398 |
mRNA splicing, via spliceosome |
Reactome:R-HSA-72163 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006397 |
mRNA processing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Castello, A et al. (2012) Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Cell 149 1393-406 PubMed GONUTS page
- ↑ Baltz, AG et al. (2012) The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. Mol. Cell 46 674-90 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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