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HUMAN:DNM3A
Contents
Species (Taxon ID) | Homo sapiens (Human). (9606) | |
Gene Name(s) | DNMT3A | |
Protein Name(s) | DNA (cytosine-5)-methyltransferase 3A
Dnmt3a DNA methyltransferase HsaIIIA DNA MTase HsaIIIA M.HsaIIIA | |
External Links | ||
UniProt | Q9Y6K1 | |
EMBL | AF067972 AF480163 AF331856 AC012074 CH471053 BC032392 BC043617 BC051864 | |
CCDS | CCDS1718.2 CCDS33157.1 CCDS46232.1 | |
RefSeq | NP_072046.2 NP_715640.2 NP_783328.1 NP_783329.1 XP_005264232.1 XP_005264233.1 XP_005264234.1 | |
UniGene | Hs.515840 | |
PDB | 2QRV 3A1A 3A1B 3LLR 3SVM 4U7P 4U7T | |
PDBsum | 2QRV 3A1A 3A1B 3LLR 3SVM 4U7P 4U7T | |
ProteinModelPortal | Q9Y6K1 | |
SMR | Q9Y6K1 | |
BioGrid | 108125 | |
DIP | DIP-38004N | |
IntAct | Q9Y6K1 | |
STRING | 9606.ENSP00000264709 | |
BindingDB | Q9Y6K1 | |
ChEMBL | CHEMBL3137291 | |
REBASE | 4119 | |
PhosphoSite | Q9Y6K1 | |
DMDM | 166215081 | |
MaxQB | Q9Y6K1 | |
PaxDb | Q9Y6K1 | |
PRIDE | Q9Y6K1 | |
DNASU | 1788 | |
Ensembl | ENST00000264709 ENST00000321117 ENST00000380746 ENST00000402667 ENST00000406659 | |
GeneID | 1788 | |
KEGG | hsa:1788 | |
UCSC | uc002rgc.4 uc002rgf.3 | |
CTD | 1788 | |
GeneCards | GC02M025455 | |
HGNC | HGNC:2978 | |
HPA | CAB009469 HPA026588 | |
MIM | 602769 615879 | |
neXtProt | NX_Q9Y6K1 | |
Orphanet | 404443 | |
PharmGKB | PA27445 | |
eggNOG | NOG70699 | |
GeneTree | ENSGT00390000008341 | |
HOGENOM | HOG000230875 | |
HOVERGEN | HBG051381 | |
InParanoid | Q9Y6K1 | |
KO | K17398 | |
OMA | FVGGMCQ | |
OrthoDB | EOG7MWGW6 | |
PhylomeDB | Q9Y6K1 | |
TreeFam | TF329039 | |
BRENDA | 2.1.1.37 | |
Reactome | REACT_200808 REACT_228108 REACT_267652 | |
ChiTaRS | DNMT3A | |
EvolutionaryTrace | Q9Y6K1 | |
GenomeRNAi | 1788 | |
NextBio | 7279 | |
PRO | PR:Q9Y6K1 | |
Proteomes | UP000005640 | |
Bgee | Q9Y6K1 | |
CleanEx | HS_DNMT3A | |
ExpressionAtlas | Q9Y6K1 | |
Genevestigator | Q9Y6K1 | |
GO | GO:0000775 GO:0005737 GO:0000791 GO:0005720 GO:0016363 GO:0005654 GO:0005634 GO:0003682 GO:0003886 GO:0051718 GO:0003677 GO:0042802 GO:0046872 GO:0045322 GO:0090116 GO:0071230 GO:0006306 GO:0043045 GO:0043046 GO:0010424 GO:0044027 GO:0006346 GO:0000122 GO:0006349 GO:0046498 GO:0046499 GO:0007283 | |
Gene3D | 3.40.50.150 | |
InterPro | IPR025766 IPR018117 IPR001525 IPR000313 IPR029063 | |
Pfam | PF00855 | |
SMART | SM00293 | |
SUPFAM | SSF53335 | |
PROSITE | PS51533 PS00094 PS50812 PS51679 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0042127 |
regulation of cell proliferation |
ECO:0000314 |
P |
FIg. 2B shows that inhibition of DNMTs decreases the proliferation rate in a dose-dependent manner. Fig. 2E shows that inhibition of DNMTs arrests most cells in the G1 phase. |
complete | |||||
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
regulates_transcription_of:(ENSEMBL:ENSG00000110092) |
Seeded From UniProt |
complete | ||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_direct_input:(ENSEMBL:ENSG00000110092) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006306 |
DNA methylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0005556 |
multiple sequence alignment evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003886 |
DNA (cytosine-5-)-methyltransferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000305 |
curator inference used in manual assertion |
GO:0000978,GO:0006306 |
P |
regulates_transcription_of:(ENSEMBL:ENSG00000076242)|regulates_transcription_of:(ENSEMBL:ENSG00000112246)|regulates_transcription_of:(ENSEMBL:ENSG00000092969) |
Seeded From UniProt |
complete | |
involved_in |
GO:0006306 |
DNA methylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_direct_input:(ENSEMBL:ENSG00000076242)|has_direct_input:(ENSEMBL:ENSG00000112246)|has_direct_input:(ENSEMBL:ENSG00000092969) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016363 |
nuclear matrix |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006306 |
DNA methylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003886 |
DNA (cytosine-5-)-methyltransferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0000791 |
euchromatin |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090116 |
C-5 methylation of cytosine |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0003886 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090116 |
C-5 methylation of cytosine |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0003886 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090116 |
C-5 methylation of cytosine |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0003886 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090116 |
C-5 methylation of cytosine |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0003886 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071230 |
cellular response to amino acid stimulus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043046 |
DNA methylation involved in gamete generation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043045 |
DNA methylation involved in embryo development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007283 |
spermatogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006349 |
regulation of gene expression by genetic imprinting |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006346 |
methylation-dependent chromatin silencing |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006306 |
DNA methylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005720 |
nuclear heterochromatin |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003886 |
DNA (cytosine-5-)-methyltransferase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003682 |
chromatin binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0001741 |
XY body |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0000792 |
heterochromatin |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0000775 |
chromosome, centromeric region |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O88508 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0097284 |
hepatocyte apoptotic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071456 |
cellular response to hypoxia |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071361 |
cellular response to ethanol |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045471 |
response to ethanol |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042493 |
response to drug |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042220 |
response to cocaine |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0033189 |
response to vitamin A |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032776 |
DNA methylation on cytosine |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032355 |
response to estradiol |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0031667 |
response to nutrient levels |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030182 |
neuron differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010942 |
positive regulation of cell death |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010288 |
response to lead ion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010212 |
response to ionizing radiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009636 |
response to toxic substance |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007568 |
aging |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003682 |
chromatin binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000278 |
mitotic cell cycle |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q1LZ53 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006306 |
DNA methylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0009008 |
DNA-methyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010468 |
regulation of gene expression |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003886 |
DNA (cytosine-5-)-methyltransferase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003714 |
transcription corepressor activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006349 |
regulation of gene expression by genetic imprinting |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045814 |
negative regulation of gene expression, epigenetic |
Reactome:R-HSA-212300 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0009008 |
DNA-methyltransferase activity |
Reactome:R-HSA-212269 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-HSA-5212679 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006325 |
chromatin organization |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032259 |
methylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ So, AY et al. (2011) DNA methyltransferase controls stem cell aging by regulating BMI1 and EZH2 through microRNAs. PLoS ONE 6 e19503 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 Hervouet, E et al. (2009) Dnmt3/transcription factor interactions as crucial players in targeted DNA methylation. Epigenetics 4 487-99 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Szemes, M et al. (2013) Control of epigenetic states by WT1 via regulation of de novo DNA methyltransferase 3A. Hum. Mol. Genet. 22 74-83 PubMed GONUTS page
- ↑ Štalekar, M et al. (2015) Proteomic analyses reveal that loss of TDP-43 affects RNA processing and intracellular transport. Neuroscience 293 157-70 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 Chen, T et al. (2002) A novel Dnmt3a isoform produced from an alternative promoter localizes to euchromatin and its expression correlates with active de novo methylation. J. Biol. Chem. 277 38746-54 PubMed GONUTS page
- ↑ Russler-Germain, DA et al. (2014) The R882H DNMT3A mutation associated with AML dominantly inhibits wild-type DNMT3A by blocking its ability to form active tetramers. Cancer Cell 25 442-54 PubMed GONUTS page
c
- Catarrhini
- GO:0071456 ! cellular response to hypoxia
- GO:0071361 ! cellular response to ethanol
- GO:0071230 ! cellular response to amino acid stimulus
- Chordata
- GO:0003682 ! chromatin binding
- GO:0006325 ! chromatin organization
- GO:0000775 ! chromosome, centromeric region
- Craniata
- GO:0005737 ! cytoplasm
d
e
h
m
n
o
- GO:0007568 ! obsolete aging
- GO:0090116 ! obsolete C-5 methylation of cytosine
- GO:0032776 ! obsolete DNA methylation on cytosine
- GO:0006306 ! obsolete DNA methylation
- GO:0043046 ! obsolete DNA methylation involved in gamete generation
- GO:0010942 ! obsolete positive regulation of cell death
- GO:0006349 ! obsolete regulation of gene expression by genomic imprinting
p
r
- GO:0042127 ! regulation of cell population proliferation
- GO:0010468 ! regulation of gene expression
- GO:0042220 ! response to cocaine
- GO:0045471 ! response to ethanol
- GO:0009636 ! response to toxic substance
- GO:0033189 ! response to vitamin A
- GO:0032355 ! response to estradiol
- GO:0031667 ! response to nutrient levels
- GO:0010288 ! response to lead ion
- GO:0010212 ! response to ionizing radiation
- GO:0042493 ! response to drug
- GO:0000978 ! RNA polymerase II cis-regulatory region sequence-specific DNA binding
t